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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-26134] Building sharding config database indexes holds up leaving drain mode</title>
                <link>https://jira.mongodb.org/browse/SERVER-26134</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;The config database&apos;s indexes are being built while the CSRS config server&apos;s primary is still in draining mode, which means it is done under a global X lock. This holds up exiting draining mode and also blocks any incoming requests (such as initial sync).&lt;/p&gt;

&lt;p&gt;This is causing initial sync failures of this kind:&lt;/p&gt;

&lt;p/&gt;
&lt;div id=&quot;syntaxplugin&quot; class=&quot;syntaxplugin&quot; style=&quot;border: 1px dashed #bbb; border-radius: 5px !important; overflow: auto; max-height: 30em;&quot;&gt;
&lt;table cellspacing=&quot;0&quot; cellpadding=&quot;0&quot; border=&quot;0&quot; width=&quot;100%&quot; style=&quot;font-size: 1em; line-height: 1.4em !important; font-weight: normal; font-style: normal; color: black;&quot;&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;[js_test:min_optime_recovery_on_failed_move_chunk_commit] 2016-09-16T02:42:21.061+0000 c22013| 2016-09-16T02:42:21.061+0000 I -        [initial sync] Fatal assertion 40088 ExceededTimeLimit: Operation timed out, request was RemoteCommand 42 -- target:WIN-K6DURTQEFVN:22011 db:local expDate:2016-09-16T02:42:11.640+0000 cmd:{ getMore: 17405408007, collection: &quot;oplog.rs&quot;, maxTimeMS: 5000, term: 0, lastKnownCommittedOpTime: { ts: Timestamp 0|0, t: -1 } } at src\mongo\db\repl\replication_coordinator_impl.cpp 614&lt;/span&gt;&lt;/pre&gt;
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&lt;p/&gt;

&lt;p&gt;Note that the getmore command below took 18 seconds to acquire the global lock:&lt;/p&gt;

&lt;p/&gt;
&lt;div id=&quot;syntaxplugin&quot; class=&quot;syntaxplugin&quot; style=&quot;border: 1px dashed #bbb; border-radius: 5px !important; overflow: auto; max-height: 30em;&quot;&gt;
&lt;table cellspacing=&quot;0&quot; cellpadding=&quot;0&quot; border=&quot;0&quot; width=&quot;100%&quot; style=&quot;font-size: 1em; line-height: 1.4em !important; font-weight: normal; font-style: normal; color: black;&quot;&gt;
		&lt;tbody &gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;c22011| 2016-09-16T02:42:01.843+0000 I REPL     [ReplicationExecutor] My optime is most up-to-date, skipping catch-up and completing transition to primary.&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;c22011| 2016-09-16T02:42:05.900+0000 I INDEX    [rsSync] build index on: config.chunks properties: { v: 2, unique: true, key: { ns: 1, min: 1 }, name: &quot;ns_1_min_1&quot;, ns: &quot;config.chunks&quot; }&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;...&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;c22011| 2016-09-16T02:42:18.855+0000 I INDEX    [rsSync] build index done.  scanned 0 total records. 2 secs&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;c22011| 2016-09-16T02:42:21.043+0000 I SHARDING [Balancer] CSRS balancer is starting&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;c22011| 2016-09-16T02:42:21.044+0000 I REPL     [rsSync] transition to primary complete; database writes are now permitted&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;c22011| 2016-09-16T02:42:21.049+0000 I COMMAND  [conn7] command local.oplog.rs command: getMore { getMore: 17405408007, collection: &quot;oplog.rs&quot;, maxTimeMS: 5000, term: 0, lastKnownCommittedOpTime: { ts: Timestamp 0|0, t: -1 } } originatingCommand: { find: &quot;oplog.rs&quot;, filter: { ts: { $gte: Timestamp 1473993702000|1 } }, tailable: true, oplogReplay: true, awaitData: true, maxTimeMS: 60000, term: 0 } planSummary: COLLSCAN cursorid:17405408007 keysExamined:0 docsExamined:0 numYields:0 nreturned:0 reslen:352 locks:{ Global: { acquireCount: { r: 4 }, acquireWaitCount: { r: 1 }, timeAcquiringMicros: { r: 18627803 } }, Database: { acquireCount: { r: 2 } }, oplog: { acquireCount: { r: 2 } } } protocol:op_command 19408ms&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;c22011| 2016-09-16T02:42:31.102+0000 I SHARDING [Balancer] CSRS balancer is now stopped&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
			&lt;/tbody&gt;
&lt;/table&gt;
&lt;/div&gt;
&lt;p/&gt;</description>
                <environment></environment>
        <key id="316720">SERVER-26134</key>
            <summary>Building sharding config database indexes holds up leaving drain mode</summary>
                <type id="1" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14703&amp;avatarType=issuetype">Bug</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="2">Won&apos;t Fix</resolution>
                                        <assignee username="backlog-server-sharding">[DO NOT USE] Backlog - Sharding Team</assignee>
                                    <reporter username="kaloian.manassiev@mongodb.com">Kaloian Manassiev</reporter>
                        <labels>
                            <label>PM-108</label>
                    </labels>
                <created>Fri, 16 Sep 2016 14:54:37 +0000</created>
                <updated>Tue, 6 Dec 2022 04:16:39 +0000</updated>
                            <resolved>Thu, 2 Jan 2020 14:17:55 +0000</resolved>
                                    <version>3.3.12</version>
                                                    <component>Sharding</component>
                                        <votes>0</votes>
                                    <watches>6</watches>
                                                                                                                <comments>
                            <comment id="2698284" author="sheeri.cabral" created="Thu, 2 Jan 2020 14:17:55 +0000"  >&lt;p&gt;wontfix and there&apos;s a workaround for the testing issue.&lt;/p&gt;</comment>
                            <comment id="1488074" author="judah.schvimer" created="Mon, 30 Jan 2017 15:23:13 +0000"  >&lt;p&gt;I filed &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-27854&quot; title=&quot;initiate replicasets faster in replicaset.py&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-27854&quot;&gt;&lt;del&gt;SERVER-27854&lt;/del&gt;&lt;/a&gt; for the workaround.&lt;/p&gt;</comment>
                            <comment id="1488067" author="kaloian.manassiev" created="Mon, 30 Jan 2017 15:16:53 +0000"  >&lt;p&gt;Unfortunately, we have no plans of fixing this any time soon. At the time when these indexes are built there should not be any data in the config database, so we aren&apos;t considering is as a bug in practice. I understand that it is making testing difficult, but fixing it is not trivial.&lt;/p&gt;</comment>
                            <comment id="1488045" author="judah.schvimer" created="Mon, 30 Jan 2017 15:02:50 +0000"  >&lt;p&gt;&lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=kaloian.manassiev&quot; class=&quot;user-hover&quot; rel=&quot;kaloian.manassiev&quot;&gt;kaloian.manassiev&lt;/a&gt;, Is there any plan to address this ticket in the near future if we do not do the above workaround? I would prefer to fix this rather than work around it, but if the fix is not going to happen for a while, it is worth doing the workaround.&lt;/p&gt;</comment>
                            <comment id="1487384" author="max.hirschhorn@10gen.com" created="Fri, 27 Jan 2017 23:13:24 +0000"  >&lt;p&gt;&lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=judah.schvimer&quot; class=&quot;user-hover&quot; rel=&quot;judah.schvimer&quot;&gt;judah.schvimer&lt;/a&gt;, &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=spencer&quot; class=&quot;user-hover&quot; rel=&quot;spencer&quot;&gt;spencer&lt;/a&gt;, &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=milkie&quot; class=&quot;user-hover&quot; rel=&quot;milkie&quot;&gt;milkie&lt;/a&gt;, is there consensus on whether we should work around this issue in our testing infrastructure for now by changing replica sets spawned by resmoke.py to do a reconfig after the primary of a 1-node replica set is elected? (akin to &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-20844&quot; title=&quot;Start ReplSetTests faster wrt initial election&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-20844&quot;&gt;&lt;del&gt;SERVER-20844&lt;/del&gt;&lt;/a&gt;)&lt;/p&gt;</comment>
                            <comment id="1483746" author="judah.schvimer" created="Tue, 24 Jan 2017 14:29:30 +0000"  >&lt;p&gt;Yes, I think changing &lt;a href=&quot;https://github.com/mongodb/mongo/blob/23c16f6f2ce1fe4a87610ae5e7b1fe9927a91286/buildscripts/resmokelib/testing/fixtures/replicaset.py#L92-L134&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;this section&lt;/a&gt; of replicaset.py would fix the remaining cases. I am not aware of any other ways that we start up replicasets in our tests.&lt;/p&gt;

&lt;p&gt;That said, if there&apos;s a way to fix this problem by not holding a global lock for as long, that would be a much better fix.&lt;/p&gt;</comment>
                            <comment id="1483431" author="spencer" created="Tue, 24 Jan 2017 01:05:51 +0000"  >&lt;p&gt;&lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=judah.schvimer&quot; class=&quot;user-hover&quot; rel=&quot;judah.schvimer&quot;&gt;judah.schvimer&lt;/a&gt; If we changed resmoke.py to do the same thing that the shell does in &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-20844&quot; title=&quot;Start ReplSetTests faster wrt initial election&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-20844&quot;&gt;&lt;del&gt;SERVER-20844&lt;/del&gt;&lt;/a&gt;, would that fix it?&lt;/p&gt;</comment>
                            <comment id="1483187" author="judah.schvimer" created="Mon, 23 Jan 2017 22:29:45 +0000"  >&lt;p&gt;There are now examples of this occurring in ways that &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-20844&quot; title=&quot;Start ReplSetTests faster wrt initial election&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-20844&quot;&gt;&lt;del&gt;SERVER-20844&lt;/del&gt;&lt;/a&gt; doesn&apos;t fix (such as in the python test fixtures). We no longer can close this with &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-20844&quot; title=&quot;Start ReplSetTests faster wrt initial election&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-20844&quot;&gt;&lt;del&gt;SERVER-20844&lt;/del&gt;&lt;/a&gt;.&lt;/p&gt;</comment>
                            <comment id="1459308" author="milkie" created="Thu, 15 Dec 2016 20:19:39 +0000"  >&lt;p&gt;I agree with Judah.  Implementing &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-20844&quot; title=&quot;Start ReplSetTests faster wrt initial election&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-20844&quot;&gt;&lt;del&gt;SERVER-20844&lt;/del&gt;&lt;/a&gt; would have many benefits, including fixing this ticket.&lt;/p&gt;</comment>
                            <comment id="1459300" author="judah.schvimer" created="Thu, 15 Dec 2016 20:14:18 +0000"  >&lt;p&gt;I think &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-20844&quot; title=&quot;Start ReplSetTests faster wrt initial election&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-20844&quot;&gt;&lt;del&gt;SERVER-20844&lt;/del&gt;&lt;/a&gt; could prevent this from manifesting in our tests. This occurs because secondaries do initial sync before the primary has finished transitioning to PRIMARY. &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-20844&quot; title=&quot;Start ReplSetTests faster wrt initial election&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-20844&quot;&gt;&lt;del&gt;SERVER-20844&lt;/del&gt;&lt;/a&gt; would not start initial sync on the secondaries until the primary was established and had created these indexes.&lt;/p&gt;</comment>
                            <comment id="1394988" author="milkie" created="Tue, 27 Sep 2016 19:33:12 +0000"  >&lt;p&gt;I&apos;m not sure this is the root of the problem.  There are certainly other operations that can occur during drain mode, such as foreground index builds for user collections with data, that would take longer than the config server&apos;s index builds on empty collections.  Perhaps the real solution here is to enhance index builds to run concurrently with other replicated ops, and produce a &quot;commit&quot; operation that actually commits the index and makes it visible.  Then index builds wouldn&apos;t necessarily block replication.&lt;/p&gt;</comment>
                    </comments>
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                                                        </outwardlinks>
                                                                <inwardlinks description="is related to">
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            <issuekey id="350264">SERVER-27854</issuekey>
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                                                                                                                                                                                                                                                                                                                                                                                                                                                                        <customfield id="customfield_22870" key="com.onresolve.jira.groovy.groovyrunner:scripted-field">
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                                                                                                                                                                                                                                                                                                                                                                                    <customfield id="customfield_14350" key="com.pyxis.greenhopper.jira:gh-lexo-rank">
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