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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-31794] REPL opslog corrupts SECONDARY members.</title>
                <link>https://jira.mongodb.org/browse/SERVER-31794</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;When a server came down with a hard stop, it recovered and did a rollback and started to replicate the PRIMARY opslog. As it was replicating the log, it a writer worker exception error that caused a Fatal Assertion. Even after wiping the secondary, the replset replication hit the same error continually. The only solution was to nuke the entire replicaset and arbiters from orbit and rebuild.&lt;/p&gt;

&lt;p&gt;PRIMARY:&lt;br/&gt;
Metadata: { acquireCount: &lt;/p&gt;
{ w: 1 }
&lt;p&gt; }, oplog: { acquireCount: &lt;/p&gt;
{ W: 1 }
&lt;p&gt; } } protocol:op_query 155ms&lt;br/&gt;
2017-03-25T16:29:36.208+0000 I NETWORK  &lt;span class=&quot;error&quot;&gt;&amp;#91;conn64&amp;#93;&lt;/span&gt; end connection 10.196.36.193:20019 (49 connections now open)&lt;br/&gt;
2017-03-25T16:29:36.209+0000 I NETWORK  &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; connection accepted from 10.196.36.193:20029 #69 (50 connections now open)&lt;br/&gt;
2017-03-25T16:29:36.211+0000 I NETWORK  &lt;span class=&quot;error&quot;&gt;&amp;#91;conn69&amp;#93;&lt;/span&gt; end connection 10.196.36.193:20029 (49 connections now open)&lt;br/&gt;
2017-03-25T16:29:36.407+0000 I NETWORK  &lt;span class=&quot;error&quot;&gt;&amp;#91;conn55&amp;#93;&lt;/span&gt; end connection 10.196.36.193:20003 (48 connections now open)&lt;br/&gt;
2017-03-25T16:29:36.408+0000 I NETWORK  &lt;span class=&quot;error&quot;&gt;&amp;#91;conn62&amp;#93;&lt;/span&gt; end connection 10.196.36.193:20015 (48 connections now open)&lt;br/&gt;
2017-03-25T16:29:36.917+0000 I ASIO     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; dropping unhealthy pooled connection to server1.site:33000&lt;br/&gt;
2017-03-25T16:29:36.918+0000 I ASIO     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; after drop, pool was empty, going to spawn some connections&lt;br/&gt;
2017-03-25T16:29:44.935+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; Error in heartbeat request to server1.site:33000; HostUnreachable: Connection refused&lt;br/&gt;
....&lt;br/&gt;
2017-03-25T16:29:45.659+0000 I COMMAND  &lt;span class=&quot;error&quot;&gt;&amp;#91;conn13&amp;#93;&lt;/span&gt; command admin.$cmd command: isMaster &lt;/p&gt;
{ ismaster: 1 }
&lt;p&gt; keyUpdates:0 writeConflicts:0 numYields:0 reslen:397 locks:{} protocol:op_query 521ms&lt;br/&gt;
...&lt;br/&gt;
SECONDARY&lt;br/&gt;
2017-03-25T16:29:28.219+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; This node is server1.site:33000 in the config&lt;br/&gt;
2017-03-25T16:29:28.219+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; transition to STARTUP2&lt;br/&gt;
2017-03-25T16:29:28.219+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; Starting replication applier threads&lt;br/&gt;
2017-03-25T16:29:28.221+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; transition to RECOVERING&lt;br/&gt;
2017-03-25T16:29:28.224+0000 I ASIO     &lt;span class=&quot;error&quot;&gt;&amp;#91;NetworkInterfaceASIO-Replication-0&amp;#93;&lt;/span&gt; Successfully connected to arbiter.site:33000&lt;br/&gt;
2017-03-25T16:29:28.224+0000 I ASIO     &lt;span class=&quot;error&quot;&gt;&amp;#91;NetworkInterfaceASIO-Replication-0&amp;#93;&lt;/span&gt; Successfully connected to server2.site:33000&lt;br/&gt;
2017-03-25T16:29:28.225+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; Member arbiter.site:33000 is now in state ARBITER&lt;br/&gt;
2017-03-25T16:29:28.225+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; Member server2.site:33000 is now in state PRIMARY&lt;br/&gt;
2017-03-25T16:29:28.227+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; transition to SECONDARY&lt;br/&gt;
...&lt;br/&gt;
2017-03-25T16:29:34.223+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; syncing from: server2.site:33000&lt;br/&gt;
2017-03-25T16:29:34.227+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;SyncSourceFeedback&amp;#93;&lt;/span&gt; setting syncSourceFeedback to server2.site:33000&lt;br/&gt;
2017-03-25T16:29:34.231+0000 I ASIO     &lt;span class=&quot;error&quot;&gt;&amp;#91;NetworkInterfaceASIO-BGSync-0&amp;#93;&lt;/span&gt; Successfully connected to server2.site:33000&lt;br/&gt;
2017-03-25T16:29:34.238+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; Starting rollback due to OplogStartMissing: our last op time fetched: (term: 4, timestamp: Mar 25 16:26:13:21). source&apos;s GTE: (term: 5, timestamp: Mar 25 16:29:25:1) hashes: (-7718240682381005025/-2391617886558021771)&lt;br/&gt;
2017-03-25T16:29:34.238+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; beginning rollback&lt;br/&gt;
2017-03-25T16:29:34.238+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 0&lt;br/&gt;
2017-03-25T16:29:34.238+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; transition to ROLLBACK&lt;br/&gt;
2017-03-25T16:29:34.239+0000 I NETWORK  &lt;span class=&quot;error&quot;&gt;&amp;#91;conn4&amp;#93;&lt;/span&gt; end connection 10.196.36.203:20550 (5 connections now open)&lt;br/&gt;
2017-03-25T16:29:34.239+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 1&lt;br/&gt;
..&lt;br/&gt;
2017-03-25T16:29:34.241+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 2 FindCommonPoint&lt;br/&gt;
2017-03-25T16:29:34.242+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback our last optime:   Mar 25 16:26:13:21&lt;br/&gt;
2017-03-25T16:29:34.242+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback their last optime: Mar 25 16:29:34:22&lt;br/&gt;
2017-03-25T16:29:34.242+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback diff in end of log times: -201 seconds&lt;br/&gt;
2017-03-25T16:29:34.747+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 3 fixup&lt;br/&gt;
2017-03-25T16:29:34.787+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 3.5&lt;br/&gt;
2017-03-25T16:29:34.891+0000 I NETWORK  &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; connection accepted from 10.196.36.195:4166 #12 (1 connection now open)&lt;br/&gt;
2017-03-25T16:29:34.915+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 4 n:1&lt;br/&gt;
2017-03-25T16:29:34.915+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; minvalid=(term: 5, timestamp: Mar 25 16:29:34:33)&lt;br/&gt;
2017-03-25T16:29:34.916+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 4.1.1 coll resync ConfigData&lt;br/&gt;
2017-03-25T16:29:34.945+0000 I INDEX    &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; build index on: ConfigData properties: { v: 1, key: &lt;/p&gt;
{ _id: 1 }
&lt;p&gt;, name: &quot;&lt;em&gt;id&lt;/em&gt;&quot;, ns: &quot;ConfigData&quot; }&lt;br/&gt;
2017-03-25T16:29:34.945+0000 I INDEX    &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt;       building index using bulk method&lt;br/&gt;
2017-03-25T16:29:34.946+0000 I INDEX    &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; build index done.  scanned 409 total records. 0 sec&lt;br/&gt;
....&lt;br/&gt;
2017-03-25T16:29:36.155+0000 I INDEX    &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; build index done.  scanned 769 total records. 0 secs&lt;br/&gt;
2017-03-25T16:29:36.155+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 4.2&lt;br/&gt;
2017-03-25T16:29:36.156+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; minvalid=(term: 5, timestamp: Mar 25 16:29:36:1)&lt;br/&gt;
2017-03-25T16:29:36.156+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 4.3&lt;br/&gt;
2017-03-25T16:29:36.156+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 4.6&lt;br/&gt;
2017-03-25T16:29:36.156+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback drop: Data1&lt;br/&gt;
2017-03-25T16:29:36.157+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback drop: Data2&lt;br/&gt;
2017-03-25T16:29:36.165+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback drop: Data3&lt;br/&gt;
2017-03-25T16:29:36.179+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 4.7&lt;br/&gt;
2017-03-25T16:29:36.197+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 5 d:4 u:71&lt;br/&gt;
2017-03-25T16:29:36.197+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback 6&lt;br/&gt;
2017-03-25T16:29:36.197+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback done&lt;br/&gt;
2017-03-25T16:29:36.197+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;rsBackgroundSync&amp;#93;&lt;/span&gt; rollback finished&lt;br/&gt;
2017-03-25T16:29:36.197+0000 I NETWORK  &lt;span class=&quot;error&quot;&gt;&amp;#91;SyncSourceFeedback&amp;#93;&lt;/span&gt; Socket say send() errno:9 Bad file descriptor 10.196.36.195:33000&lt;br/&gt;
2017-03-25T16:29:36.207+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; transition to RECOVERING&lt;br/&gt;
2017-03-25T16:29:36.208+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;ReplicationExecutor&amp;#93;&lt;/span&gt; syncing from: server2.site:33000&lt;br/&gt;
017-03-25T16:29:36.356+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;SyncSourceFeedback&amp;#93;&lt;/span&gt; SyncSourceFeedback error sending update: socket exception &lt;span class=&quot;error&quot;&gt;&amp;#91;SEND_ERROR&amp;#93;&lt;/span&gt; for 10.196.36.195:33000&lt;br/&gt;
2017-03-25T16:29:36.356+0000 I REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;SyncSourceFeedback&amp;#93;&lt;/span&gt; updateUpstream failed: Location9001: socket exception &lt;span class=&quot;error&quot;&gt;&amp;#91;SEND_ERROR&amp;#93;&lt;/span&gt; for 10.196.36.195:33000, will retry&lt;br/&gt;
2017-03-25T16:29:36.365+0000 F REPL     &lt;span class=&quot;error&quot;&gt;&amp;#91;repl writer worker 2&amp;#93;&lt;/span&gt; writer worker caught exception:  :: caused by :: 26 Failed to apply insert due to missing collection: &lt;/p&gt;
{ ts: Timestamp 1490459371000|82, t: 5, h: 7141407996441188723, v: 2, op: &quot;i&quot;, &amp;lt;collection data here&amp;gt; }
&lt;p&gt;2017-03-25T16:29:36.365+0000 I -        &lt;span class=&quot;error&quot;&gt;&amp;#91;repl writer worker 2&amp;#93;&lt;/span&gt; Fatal Assertion 16360&lt;br/&gt;
2017-03-25T16:29:36.365+0000 I -        &lt;span class=&quot;error&quot;&gt;&amp;#91;repl writer worker 2&amp;#93;&lt;/span&gt;&lt;/p&gt;
</description>
                <environment></environment>
        <key id="453982">SERVER-31794</key>
            <summary>REPL opslog corrupts SECONDARY members.</summary>
                <type id="1" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14703&amp;avatarType=issuetype">Bug</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="4">Incomplete</resolution>
                                        <assignee username="kelsey.schubert@mongodb.com">Kelsey Schubert</assignee>
                                    <reporter username="wallisr">Andy Wallis</reporter>
                        <labels>
                    </labels>
                <created>Thu, 2 Nov 2017 00:53:34 +0000</created>
                <updated>Sun, 25 Nov 2018 17:16:23 +0000</updated>
                            <resolved>Thu, 25 Oct 2018 19:34:28 +0000</resolved>
                                    <version>3.2.3</version>
                                                    <component>Replication</component>
                                        <votes>0</votes>
                                    <watches>7</watches>
                                                                                                                <comments>
                            <comment id="1926951" author="thomas.schubert" created="Thu, 21 Jun 2018 00:42:17 +0000"  >&lt;p&gt;Hi &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=wallisr&quot; class=&quot;user-hover&quot; rel=&quot;wallisr&quot;&gt;wallisr&lt;/a&gt;,&lt;/p&gt;

&lt;p&gt;Have you observed this issue since upgrading to a more recent version of MongoDB?&lt;/p&gt;

&lt;p&gt;Thanks,&lt;br/&gt;
Kelsey&lt;/p&gt;</comment>
                            <comment id="1824694" author="thomas.schubert" created="Tue, 6 Mar 2018 17:03:25 +0000"  >&lt;p&gt;Thanks for the update, please let us know whether 3.2.14 resolves the issue.&lt;/p&gt;</comment>
                            <comment id="1824261" author="wallisr" created="Tue, 6 Mar 2018 13:29:51 +0000"  >&lt;p&gt;It is still an issue. We are seeing if the 3.2.14 will fix the issue. &lt;/p&gt;</comment>
                            <comment id="1824108" author="thomas.schubert" created="Tue, 6 Mar 2018 07:09:47 +0000"  >&lt;p&gt;Hi &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=wallisr&quot; class=&quot;user-hover&quot; rel=&quot;wallisr&quot;&gt;wallisr&lt;/a&gt;,&lt;/p&gt;

&lt;p&gt;Sorry this slipped through the cracks. Is this still an issue for you? While we cannot say for sure that this issue has been fixed in more recent versions, there have been a number of improvements and bug fixes in this space that may resolve what you&apos;re seeing. Have you been able to upgrade to 3.4 or a later version of 3.2?&lt;/p&gt;

&lt;p&gt;Kind regards,&lt;br/&gt;
Kelsey&lt;/p&gt;</comment>
                            <comment id="1715552" author="wallisr" created="Thu, 2 Nov 2017 16:22:23 +0000"  >&lt;p&gt;We still have the logs, but they cannot be posted in an open forum and can only be shared under a NDA.&lt;br/&gt;
We can re-create the issue as required.&lt;br/&gt;
We cannot upgrade to 3.4 without significant effort. Has this exact issue been fixed in a later 3.2 release?&lt;/p&gt;</comment>
                            <comment id="1715545" author="ramon.fernandez" created="Thu, 2 Nov 2017 16:19:03 +0000"  >&lt;p&gt;Sorry to hear you run into issues &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=wallisr&quot; class=&quot;user-hover&quot; rel=&quot;wallisr&quot;&gt;wallisr&lt;/a&gt;. Without the full logs it is difficult to determine exactly what happened. If a secondary is missing a collection the fatal assertion is expected (&lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-23390&quot; title=&quot;Missing collection during replication causes shutdown&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-23390&quot;&gt;&lt;del&gt;SERVER-23390&lt;/del&gt;&lt;/a&gt;).&lt;/p&gt;

&lt;p&gt;The behavior you describe is very similar to &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-26741&quot; title=&quot;&amp;quot;Fatal Assertion 16360&amp;quot; triggered by temporary collections dropped when restarted in standalone mode&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-26741&quot;&gt;&lt;del&gt;SERVER-26741&lt;/del&gt;&lt;/a&gt;, even the scenario is different from yours. In addition, there have been many improvements and bug fixes in rollback behavior since 3.2.3, so my recommendation would be to upgrade to 3.4.10 to benefit from those.&lt;/p&gt;

&lt;p&gt;If you&apos;ve rebuilt the replica set then I&apos;m guessing you no longer have logs and the oplog collection for us to investigate further, is that correct?&lt;/p&gt;

&lt;p&gt;Thanks,&lt;br/&gt;
Ram&#243;n.&lt;/p&gt;</comment>
                    </comments>
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