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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-3212] Got signal: 11 (Segmentation fault)</title>
                <link>https://jira.mongodb.org/browse/SERVER-3212</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;only 1.8.2, 1.8.1 fine.&lt;/p&gt;

&lt;p&gt;Tue Jun  7 16:03:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; MongoDB starting : pid=4609 port=9601 dbpath=/home/mongodb 64-bit &lt;br/&gt;
Tue Jun  7 16:03:32 Invalid access at address: 0x1&lt;/p&gt;

&lt;p&gt;Tue Jun  7 16:03:32 Got signal: 11 (Segmentation fault).&lt;/p&gt;

&lt;p&gt;Tue Jun  7 16:03:32 Backtrace:&lt;br/&gt;
0x8a7a29 0x8a8000 0x37a480eb10 0x37a3c79b60 0x56d6f3 0x8ac592 0x8ad478 0x8b30af 0x37a3c1d994 0x4e10c9 &lt;br/&gt;
 /usr/local/mongodb/bin/mongod(_ZN5mongo10abruptQuitEi+0x399) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a7a29&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/local/mongodb/bin/mongod(_ZN5mongo24abruptQuitWithAddrSignalEiP7siginfoPv+0x220) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a8000&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib64/libpthread.so.0 &lt;span class=&quot;error&quot;&gt;&amp;#91;0x37a480eb10&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib64/libc.so.6(strlen+0x10) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x37a3c79b60&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/local/mongodb/bin/mongod(_ZN5mongo13show_warningsEv+0x363) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x56d6f3&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/local/mongodb/bin/mongod(_ZN5mongo14_initAndListenEiPKc+0xf2) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8ac592&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/local/mongodb/bin/mongod(_ZN5mongo13initAndListenEiPKc+0x18) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8ad478&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/local/mongodb/bin/mongod(main+0x5acf) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8b30af&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib64/libc.so.6(__libc_start_main+0xf4) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x37a3c1d994&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/local/mongodb/bin/mongod(__gxx_personality_v0+0x3a1) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x4e10c9&amp;#93;&lt;/span&gt;&lt;/p&gt;

&lt;p&gt;Tue Jun  7 16:03:32 ERROR: Client::shutdown not called: initandlisten&lt;/p&gt;</description>
                <environment>Centos 5 64bit</environment>
        <key id="17980">SERVER-3212</key>
            <summary>Got signal: 11 (Segmentation fault)</summary>
                <type id="1" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14703&amp;avatarType=issuetype">Bug</type>
                                            <priority id="1" iconUrl="https://jira.mongodb.org/images/icons/priorities/blocker.svg">Blocker - P1</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="9">Done</resolution>
                                        <assignee username="mathias@mongodb.com">Mathias Stearn</assignee>
                                    <reporter username="paulgao">Paul Gao</reporter>
                        <labels>
                    </labels>
                <created>Tue, 7 Jun 2011 08:13:29 +0000</created>
                <updated>Tue, 12 Jul 2016 00:17:13 +0000</updated>
                            <resolved>Wed, 27 Jul 2011 18:54:55 +0000</resolved>
                                    <version>1.8.1</version>
                                    <fixVersion>1.8.3</fixVersion>
                                    <component>Stability</component>
                                        <votes>4</votes>
                                    <watches>5</watches>
                                                                                                                <comments>
                            <comment id="44906" author="eliot" created="Wed, 27 Jul 2011 18:54:55 +0000"  >&lt;p&gt;added a new case for the file  io issue&lt;/p&gt;</comment>
                            <comment id="40911" author="redbeard0531" created="Wed, 6 Jul 2011 17:41:38 +0000"  >&lt;p&gt;@Jalmari: I think that is an unrelated issue. Could you open up another ticket?&lt;/p&gt;</comment>
                            <comment id="39305" author="jalava" created="Mon, 27 Jun 2011 10:40:59 +0000"  >&lt;p&gt;After upgrading to 1.8.2 and enabling chunk balancer again, it started first just fine and then segfaulted with:&lt;/p&gt;


&lt;p&gt;Mon Jun 27 10:32:54 Invalid access at address: 0&lt;/p&gt;

&lt;p&gt;Mon Jun 27 10:32:54 Got signal: 11 (Segmentation fault).&lt;br/&gt;
Mon Jun 27 10:32:54 Backtrace:&lt;br/&gt;
0x8a8039 0x8a8610 0x7f5fc8d398f0 0x7f5fc8abe787 0x7f5fc8abf04c 0x6d7863 0x6d10f2 0x7dd347 0x7de8f1 0x647e45 0x64b3de 0x7547a5 0x759ec8 0x8a8fce 0x8bb630 0x7&lt;br/&gt;
f5fc8d309ca 0x7f5fc82df70d &lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo10abruptQuitEi+0x399) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a8039&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo24abruptQuitWithAddrSignalEiP7siginfoPv+0x220) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a8610&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib/libpthread.so.0(+0xf8f0) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7f5fc8d398f0&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/lib/libstdc++.so.6(_ZNSs4_Rep8_M_cloneERKSaIcEm+0x47) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7f5fc8abe787&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/lib/libstdc++.so.6(_ZNSsC1ERKSs+0x3c) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7f5fc8abf04c&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZNK5mongo11ReplSetImpl16_summarizeStatusERNS_14BSONObjBuilderE+0x753) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x6d7863&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo19CmdReplSetGetStatus3runERKSsRNS_7BSONObjERSsRNS_14BSONObjBuilderEb+0x122) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x6d10f2&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo11execCommandEPNS_7CommandERNS_6ClientEiPKcRNS_7BSONObjERNS_14BSONObjBuilderEb+0x227) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7dd347&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo12_runCommandsEPKcRNS_7BSONObjERNS_10BufBuilderERNS_14BSONObjBuilderEbi+0x831) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7de8f1&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo11runCommandsEPKcRNS_7BSONObjERNS_5CurOpERNS_10BufBuilderERNS_14BSONObjBuilderEbi+0x35) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x647e45&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(&lt;em&gt;ZN5mongo8runQueryERNS_7MessageERNS_12QueryMessageERNS_5CurOpES1&lt;/em&gt;+0x324e) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x64b3de&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod() &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7547a5&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo16assembleResponseERNS_7MessageERNS_10DbResponseERKNS_8SockAddrE+0x5b8) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x759ec8&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo10connThreadEPNS_13MessagingPortE+0x21e) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a8fce&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(thread_proxy+0x80) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8bb630&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib/libpthread.so.0(+0x69ca) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7f5fc8d309ca&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib/libc.so.6(clone+0x6d) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7f5fc82df70d&amp;#93;&lt;/span&gt;&lt;br/&gt;
Mon Jun 27 10:32:54 Invalid access at address: 0x4&lt;/p&gt;

&lt;p&gt;Mon Jun 27 10:32:54 Got signal: 11 (Segmentation fault).&lt;br/&gt;
Mon Jun 27 10:32:54 Backtrace:&lt;br/&gt;
0x8a8039 0x8a8610 0x7f5fc8d398f0 0x7128f5 0x711052 0x74cdb1 0x876ed7 0x7dd347 0x7de8f1 0x647e45 0x64b3de 0x7547a5 0x759ec8 0x8a8fce 0x8bb630 0x7f5fc8d309ca &lt;br/&gt;
0x7f5fc82df70d &lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo10abruptQuitEi+0x399) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a8039&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo24abruptQuitWithAddrSignalEiP7siginfoPv+0x220) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a8610&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib/libpthread.so.0(+0xf8f0) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7f5fc8d398f0&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod() &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7128f5&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo5logOpEPKcS1_RKNS_7BSONObjEPS2_Pb+0x42) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x711052&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo7Helpers11removeRangeERKSsRKNS_7BSONObjES5_bbPNS0_14RemoveCallbackE+0x791) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x74cdb1&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo16MoveChunkCommand3runERKSsRNS_7BSONObjERSsRNS_14BSONObjBuilderEb+0x8047) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x876ed7&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo11execCommandEPNS_7CommandERNS_6ClientEiPKcRNS_7BSONObjERNS_14BSONObjBuilderEb+0x227) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7dd347&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo12_runCommandsEPKcRNS_7BSONObjERNS_10BufBuilderERNS_14BSONObjBuilderEbi+0x831) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7de8f1&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo11runCommandsEPKcRNS_7BSONObjERNS_5CurOpERNS_10BufBuilderERNS_14BSONObjBuilderEbi+0x35) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x647e45&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(&lt;em&gt;ZN5mongo8runQueryERNS_7MessageERNS_12QueryMessageERNS_5CurOpES1&lt;/em&gt;+0x324e) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x64b3de&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod() &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7547a5&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo16assembleResponseERNS_7MessageERNS_10DbResponseERKNS_8SockAddrE+0x5b8) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x759ec8&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(_ZN5mongo10connThreadEPNS_13MessagingPortE+0x21e) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a8fce&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /usr/bin/mongod(thread_proxy+0x80) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8bb630&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib/libpthread.so.0(+0x69ca) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7f5fc8d309ca&amp;#93;&lt;/span&gt; /lib/libc.so.6(clone+0x6d) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7f5fc82df70d&amp;#93;&lt;/span&gt;&lt;/p&gt;

&lt;p&gt;EDIT:&lt;br/&gt;
This happened right after we started another slave while moveChunk was doing the move. Our second attempt didn&apos;t cause seg fault.&lt;/p&gt;</comment>
                            <comment id="38440" author="kamaradclimber" created="Tue, 21 Jun 2011 07:23:05 +0000"  >&lt;p&gt;The File IO error appears right AFTER the numa_maps warning. It&apos;s still appears in 1.8.2-final&lt;/p&gt;</comment>
                            <comment id="38375" author="redbeard0531" created="Mon, 20 Jun 2011 20:54:08 +0000"  >&lt;p&gt;@Paul Gao: Just want to verify that the File I/O error comes &lt;b&gt;after&lt;/b&gt; the numa_maps warning. If so I think it indicates a different problem...&lt;/p&gt;

&lt;p&gt;@everyone else: Is there a File I/O error &lt;b&gt;before&lt;/b&gt; the numa_maps warning and are you still getting that warning on 1.8.2-final?&lt;/p&gt;</comment>
                            <comment id="38296" author="kamaradclimber" created="Mon, 20 Jun 2011 07:16:41 +0000"  >&lt;p&gt;my numa maps is attached.&lt;/p&gt;

&lt;p&gt;uname -a&lt;br/&gt;
Linux SYS-L121-9-1 2.6.18-164.15.1.el5 #1 SMP Wed Mar 17 11:30:06 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux&lt;/p&gt;</comment>
                            <comment id="38167" author="grmblfrz" created="Sat, 18 Jun 2011 12:11:26 +0000"  >&lt;p&gt;output of cat proc/&lt;span class=&quot;error&quot;&gt;&amp;#91;PID_OF_MONGOD&amp;#93;&lt;/span&gt;/numa_maps&lt;/p&gt;

&lt;p&gt;uname -a:&lt;br/&gt;
Linux lnxp-3741 2.6.18-194.26.1.el5 #1 SMP Fri Oct 29 14:21:16 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux&lt;/p&gt;</comment>
                            <comment id="38143" author="paulgao" created="Sat, 18 Jun 2011 03:37:15 +0000"  >&lt;p&gt;1.8.2 final version show:&lt;br/&gt;
&quot;&lt;/p&gt;
&lt;ul&gt;
	&lt;li&gt;
	&lt;ul&gt;
		&lt;li&gt;WARNING: cannot parse numa_maps&lt;/li&gt;
	&lt;/ul&gt;
	&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;Sat Jun 18 11:32:40 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; File I/O errno:29 Illegal seek&lt;br/&gt;
&quot;&lt;/p&gt;

&lt;p&gt;normal?&lt;/p&gt;</comment>
                            <comment id="37878" author="redbeard0531" created="Thu, 16 Jun 2011 16:07:25 +0000"  >&lt;p&gt;Hmm, neither of those should be failing. Could you fire up mongod from master and if you see the warning about numa_maps attach /proc/&lt;span class=&quot;error&quot;&gt;&amp;#91;PID_OF_MONGOD&amp;#93;&lt;/span&gt;/numa_maps? There could be something odd there that isn&apos;t showing up with cat. Also please include the output of &quot;uname -a&quot; so I can see what kernel you are running.&lt;/p&gt;</comment>
                            <comment id="37875" author="grmblfrz" created="Thu, 16 Jun 2011 15:32:15 +0000"  >&lt;p&gt;output of numactl --interleave=all cat /proc/self/numa_maps:&lt;/p&gt;

&lt;p&gt;00400000 interleave=0-1 file=/bin/cat mapped=3 N0=3&lt;br/&gt;
00604000 interleave=0-1 file=/bin/cat anon=1 dirty=1 mapped=2 N0=2&lt;br/&gt;
0d455000 interleave=0-1 heap anon=3 dirty=3 active=0 N0=2 N1=1&lt;br/&gt;
33eda00000 interleave=0-1 file=/lib64/ld-2.5.so mapped=23 mapmax=34 N1=23&lt;br/&gt;
33edc1b000 interleave=0-1 file=/lib64/ld-2.5.so anon=1 dirty=1 N1=1&lt;br/&gt;
33edc1c000 interleave=0-1 file=/lib64/ld-2.5.so anon=1 dirty=1 N0=1&lt;br/&gt;
33ede00000 interleave=0-1 file=/lib64/libc-2.5.so mapped=65 mapmax=40 N1=65&lt;br/&gt;
33edf4e000 interleave=0-1 file=/lib64/libc-2.5.so&lt;br/&gt;
33ee14e000 interleave=0-1 file=/lib64/libc-2.5.so anon=1 dirty=1 mapped=3 mapmax=38 N1=3&lt;br/&gt;
33ee152000 interleave=0-1 file=/lib64/libc-2.5.so anon=1 dirty=1 N0=1&lt;br/&gt;
33ee153000 interleave=0-1 anon=4 dirty=4 active=0 N0=2 N1=2&lt;br/&gt;
2ac4ca9c4000 interleave=0-1 anon=1 dirty=1 N0=1&lt;br/&gt;
2ac4ca9d4000 interleave=0-1 anon=2 dirty=2 N0=1 N1=1&lt;br/&gt;
2ac4ca9d6000 interleave=0-1 file=/usr/lib/locale/locale-archive mapped=10 mapmax=33 N0=10&lt;br/&gt;
7fff11704000 interleave=0-1 stack anon=3 dirty=3 N0=2 N1=1&lt;/p&gt;</comment>
                            <comment id="37678" author="eliot" created="Wed, 15 Jun 2011 17:12:18 +0000"  >&lt;p&gt;the segfault is fixed in 1.8.2 - but the warning will be put back for 1.8.3&lt;/p&gt;</comment>
                            <comment id="37667" author="kamaradclimber" created="Wed, 15 Jun 2011 15:26:20 +0000"  >&lt;p&gt;Here it is :&lt;/p&gt;


&lt;p&gt;00400000 default file=/bin/cat mapped=3 N0=3&lt;br/&gt;
00604000 default file=/bin/cat anon=1 dirty=1 mapped=2 N0=2&lt;br/&gt;
0c11e000 default heap anon=3 dirty=3 active=0 N0=3&lt;br/&gt;
3d5a200000 default file=/lib64/ld-2.5.so mapped=24 mapmax=45 N0=24&lt;br/&gt;
3d5a41b000 default file=/lib64/ld-2.5.so anon=1 dirty=1 N0=1&lt;br/&gt;
3d5a41c000 default file=/lib64/ld-2.5.so anon=1 dirty=1 N0=1&lt;br/&gt;
3d5a600000 default file=/lib64/libc-2.5.so mapped=60 mapmax=49 N0=60&lt;br/&gt;
3d5a74e000 default file=/lib64/libc-2.5.so&lt;br/&gt;
3d5a94d000 default file=/lib64/libc-2.5.so anon=1 dirty=1 mapped=3 mapmax=22 N0=3&lt;br/&gt;
3d5a951000 default file=/lib64/libc-2.5.so anon=1 dirty=1 N0=1&lt;br/&gt;
3d5a952000 default anon=4 dirty=4 active=0 N0=4&lt;br/&gt;
2b5ea4273000 default anon=1 dirty=1 N0=1&lt;br/&gt;
2b5ea427e000 default anon=2 dirty=2 N0=2&lt;br/&gt;
2b5ea4280000 default file=/usr/lib/locale/locale-archive mapped=11 mapmax=6 N0=11&lt;br/&gt;
7fffd8179000 default stack anon=3 dirty=3 N0=3&lt;/p&gt;
</comment>
                            <comment id="37550" author="redbeard0531" created="Tue, 14 Jun 2011 21:32:02 +0000"  >&lt;p&gt;Yes, the fix now displays that message rather than crashing. Could you attach /proc/self/numa_maps from that box? I&apos;d like to know what format it is using that we can&apos;t parse correctly.&lt;/p&gt;</comment>
                            <comment id="36972" author="kamaradclimber" created="Fri, 10 Jun 2011 09:23:07 +0000"  >&lt;p&gt;Thanks, this works (mongod starts) ! &lt;/p&gt;

&lt;p&gt;however there is still an error displayed in addition to the warning.&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;
	&lt;ul&gt;
		&lt;li&gt;WARNING: cannot parse numa_maps&lt;/li&gt;
	&lt;/ul&gt;
	&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;Fri Jun 10 11:19:59 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; File I/O errno:29 Illegal seek&lt;br/&gt;
db version v1.8.3-pre-, pdfile version 4.5&lt;br/&gt;
Fri Jun 10 11:19:59 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; git version: 9990775e39701870c5238388aecfabda992de8e3&lt;br/&gt;
Fri Jun 10 11:19:59 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; build sys info: Linux bs-linux64.10gen.cc 2.6.21.7-2.ec2.v1.2.fc8xen #1 SMP Fri Nov 20 17:48:28 EST 2009 x86_64 BOOST_LIB_VERSION=1_41&lt;/p&gt;

&lt;p&gt;is this related ?&lt;/p&gt;</comment>
                            <comment id="36871" author="infin1ty" created="Thu, 9 Jun 2011 16:25:46 +0000"  >&lt;p&gt;Hey Eliot, a little bit up in the comments you can find my numa_maps.&lt;/p&gt;</comment>
                            <comment id="36857" author="kamaradclimber" created="Thu, 9 Jun 2011 15:55:44 +0000"  >&lt;p&gt;Here is mine.&lt;/p&gt;</comment>
                            <comment id="36856" author="eliot" created="Thu, 9 Jun 2011 15:54:11 +0000"  >&lt;p&gt;CAn you attach numa_maps?&lt;/p&gt;</comment>
                            <comment id="36854" author="infin1ty" created="Thu, 9 Jun 2011 15:51:44 +0000"  >&lt;p&gt;Just compiled, seems to work.&lt;br/&gt;
throws the can&apos;t parse numa maps warning and simply continue to load.&lt;/p&gt;</comment>
                            <comment id="36849" author="kamaradclimber" created="Thu, 9 Jun 2011 15:31:18 +0000"  >&lt;p&gt;Thanks, I&apos;ll try tomorrow.&lt;/p&gt;</comment>
                            <comment id="36843" author="auto" created="Thu, 9 Jun 2011 15:10:49 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{u&apos;login&apos;: u&apos;erh&apos;, u&apos;name&apos;: u&apos;Eliot Horowitz&apos;, u&apos;email&apos;: u&apos;eliot@10gen.com&apos;}
&lt;p&gt;Message: fix numa issue &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-3212&quot; title=&quot;Got signal: 11 (Segmentation fault)&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-3212&quot;&gt;&lt;del&gt;SERVER-3212&lt;/del&gt;&lt;/a&gt;&lt;br/&gt;
Branch: v1.8&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/9990775e39701870c5238388aecfabda992de8e3&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/9990775e39701870c5238388aecfabda992de8e3&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="36842" author="auto" created="Thu, 9 Jun 2011 15:08:18 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{u&apos;login&apos;: u&apos;erh&apos;, u&apos;name&apos;: u&apos;Eliot Horowitz&apos;, u&apos;email&apos;: u&apos;eliot@10gen.com&apos;}
&lt;p&gt;Message: fix numa issue &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-3212&quot; title=&quot;Got signal: 11 (Segmentation fault)&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-3212&quot;&gt;&lt;del&gt;SERVER-3212&lt;/del&gt;&lt;/a&gt;&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/50b5572b0859da1a6d6f266397dc20f4e5af55f9&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/50b5572b0859da1a6d6f266397dc20f4e5af55f9&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="36834" author="infin1ty" created="Thu, 9 Jun 2011 14:44:16 +0000"  >&lt;p&gt;I have commented out the check numa enabled kernel code (with the warn message), recompiled, now mongod runs well.&lt;br/&gt;
the stack trace of the crash points to startsWith in version.cpp (which goes to util/goodies.cpp), it&apos;s seems as it does not handle the sanity check that well and prevents mongod to initialize well.&lt;br/&gt;
How important is that sanity check for numa enabled kernel?&lt;/p&gt;</comment>
                            <comment id="36822" author="kamaradclimber" created="Thu, 9 Jun 2011 13:35:55 +0000"  >&lt;p&gt;I confirm that the latest build does not starts properly. As Erez, numactl show that interleaves lines start with 0-1 on our machine&lt;/p&gt;</comment>
                            <comment id="36819" author="infin1ty" created="Thu, 9 Jun 2011 12:14:10 +0000"  >&lt;p&gt;I can reproduce it on several systems.&lt;br/&gt;
I think it comes from not parsing /proc/self/numa_maps.&lt;br/&gt;
$ numactl --interleave=all cat /proc/self/numa_maps&lt;br/&gt;
00400000 interleave=0-1 file=/bin/cat mapped=3 N0=3&lt;br/&gt;
00604000 interleave=0-1 file=/bin/cat anon=1 dirty=1 mapped=2 N0=2&lt;br/&gt;
0c3be000 interleave=0-1 heap anon=3 dirty=3 active=0 N0=1 N1=2&lt;br/&gt;
3d41a00000 interleave=0-1 file=/lib64/ld-2.5.so mapped=24 mapmax=43 N0=24&lt;br/&gt;
3d41c1b000 interleave=0-1 file=/lib64/ld-2.5.so anon=1 dirty=1 N1=1&lt;br/&gt;
3d41c1c000 interleave=0-1 file=/lib64/ld-2.5.so anon=1 dirty=1 N0=1&lt;br/&gt;
3d41e00000 interleave=0-1 file=/lib64/libc-2.5.so mapped=60 mapmax=48 N0=60&lt;br/&gt;
3d41f4e000 interleave=0-1 file=/lib64/libc-2.5.so&lt;br/&gt;
3d4214d000 interleave=0-1 file=/lib64/libc-2.5.so anon=1 dirty=1 mapped=3 mapmax=30 N0=3&lt;br/&gt;
3d42151000 interleave=0-1 file=/lib64/libc-2.5.so anon=1 dirty=1 N1=1&lt;br/&gt;
3d42152000 interleave=0-1 anon=4 dirty=4 active=0 N0=2 N1=2&lt;br/&gt;
2ac82fa3f000 interleave=0-1 anon=1 dirty=1 N1=1&lt;br/&gt;
2ac82fa4b000 interleave=0-1 anon=2 dirty=2 N0=1 N1=1&lt;br/&gt;
2ac82fa4d000 interleave=0-1 file=/usr/lib/locale/locale-archive mapped=12 mapmax=15 N0=12&lt;br/&gt;
7fff54fd8000 interleave=0-1 stack anon=2 dirty=2 N0=1 N1=1&lt;br/&gt;
This output is from a server that won&apos;t load and crash immediately.&lt;/p&gt;

&lt;p&gt;$ numactl --interleave=all cat /proc/self/numa_maps                                                                                                                                               &lt;br/&gt;
00400000 interleave=0 file=/bin/cat mapped=3 active=0 N0=3&lt;br/&gt;
00604000 interleave=0 file=/bin/cat anon=1 dirty=1 mapped=2 active=1 N0=2&lt;br/&gt;
09491000 interleave=0 heap anon=3 dirty=3 active=0 N0=3&lt;br/&gt;
35dba00000 interleave=0 file=/lib64/ld-2.5.so mapped=24 mapmax=19 N0=24&lt;br/&gt;
35dbc1b000 interleave=0 file=/lib64/ld-2.5.so anon=1 dirty=1 N0=1&lt;br/&gt;
35dbc1c000 interleave=0 file=/lib64/ld-2.5.so anon=1 dirty=1 N0=1&lt;br/&gt;
35dbe00000 interleave=0 file=/lib64/libc-2.5.so mapped=60 mapmax=21 N0=60&lt;br/&gt;
35dbf4e000 interleave=0 file=/lib64/libc-2.5.so&lt;br/&gt;
35dc14d000 interleave=0 file=/lib64/libc-2.5.so anon=1 dirty=1 mapped=3 mapmax=15 N0=3&lt;br/&gt;
35dc151000 interleave=0 file=/lib64/libc-2.5.so anon=1 dirty=1 N0=1&lt;br/&gt;
35dc152000 interleave=0 anon=4 dirty=4 active=0 N0=4&lt;br/&gt;
2b3021fa1000 interleave=0 anon=1 dirty=1 N0=1&lt;br/&gt;
2b3021faa000 interleave=0 anon=2 dirty=2 N0=2&lt;br/&gt;
2b3021fac000 interleave=0 file=/usr/lib/locale/locale-archive mapped=11 mapmax=10 N0=11&lt;br/&gt;
7fff2b126000 interleave=0 stack anon=3 dirty=3 N0=3&lt;br/&gt;
This is a working one.&lt;/p&gt;

&lt;p&gt;interleave=0 works&lt;br/&gt;
interleave=0-1 does not.&lt;br/&gt;
parsing error?&lt;/p&gt;

&lt;p&gt;i use the latest code.&lt;/p&gt;</comment>
                            <comment id="36814" author="eliot" created="Thu, 9 Jun 2011 11:03:03 +0000"  >&lt;p&gt;Its in the 1.8 nightly:&lt;/p&gt;

&lt;p&gt;&lt;a href=&quot;http://downloads.mongodb.org/linux/mongodb-linux-x86_64-v1.8-latest.tgz&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;http://downloads.mongodb.org/linux/mongodb-linux-x86_64-v1.8-latest.tgz&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="36813" author="kamaradclimber" created="Thu, 9 Jun 2011 10:08:07 +0000"  >&lt;p&gt;Thanks for your reply. However it seems the build did not succeed (&lt;a href=&quot;http://buildbot.mongodb.org/builders/Nightly%20Linux%2064-bit%20v8/builds/565&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;http://buildbot.mongodb.org/builders/Nightly%20Linux%2064-bit%20v8/builds/565&lt;/a&gt;). I&apos;ll try again tomorrow and edit this message.&lt;/p&gt;

&lt;p&gt;The stack from the current (yesterday) build is :&lt;/p&gt;

&lt;p&gt;Thu Jun  9 11:51:02 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; MongoDB starting : pid=4615 port=27021 dbpath=/var/db/shd1 64-bit&lt;br/&gt;
Thu Jun  9 11:51:02 Invalid access at address: 0x1&lt;/p&gt;

&lt;p&gt;Thu Jun  9 11:51:02 Got signal: 11 (Segmentation fault).&lt;/p&gt;

&lt;p&gt;Thu Jun  9 11:51:02 Backtrace:&lt;br/&gt;
0x8a7a29 0x8a8000 0x3d5ae0eb10 0x3d5a679a10 0x56d6f3 0x8ac592 0x8ad478 0x8b30af 0x3d5a61d994 0x4e10c9&lt;br/&gt;
 ./mongod(_ZN5mongo10abruptQuitEi+0x399) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a7a29&amp;#93;&lt;/span&gt;&lt;br/&gt;
 ./mongod(_ZN5mongo24abruptQuitWithAddrSignalEiP7siginfoPv+0x220) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8a8000&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib64/libpthread.so.0 &lt;span class=&quot;error&quot;&gt;&amp;#91;0x3d5ae0eb10&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib64/libc.so.6(strlen+0x10) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x3d5a679a10&amp;#93;&lt;/span&gt;&lt;br/&gt;
 ./mongod(_ZN5mongo13show_warningsEv+0x363) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x56d6f3&amp;#93;&lt;/span&gt;&lt;br/&gt;
 ./mongod(_ZN5mongo14_initAndListenEiPKc+0xf2) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8ac592&amp;#93;&lt;/span&gt;&lt;br/&gt;
 ./mongod(_ZN5mongo13initAndListenEiPKc+0x18) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8ad478&amp;#93;&lt;/span&gt;&lt;br/&gt;
 ./mongod(main+0x5acf) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8b30af&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib64/libc.so.6(__libc_start_main+0xf4) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x3d5a61d994&amp;#93;&lt;/span&gt;&lt;br/&gt;
 ./mongod(__gxx_personality_v0+0x3a1) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x4e10c9&amp;#93;&lt;/span&gt;&lt;/p&gt;

&lt;p&gt;Thu Jun  9 11:51:02 dbexit:&lt;br/&gt;
Thu Jun  9 11:51:02 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; File I/O errno:29 Illegal seek&lt;br/&gt;
shutdown: going to close listening sockets...&lt;br/&gt;
Thu Jun  9 11:51:02 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: going to flush diaglog...&lt;br/&gt;
Thu Jun  9 11:51:02 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: going to close sockets...&lt;br/&gt;
Thu Jun  9 11:51:02 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: waiting for fs preallocator...&lt;br/&gt;
Thu Jun  9 11:51:02 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: closing all files...&lt;br/&gt;
Thu Jun  9 11:51:02 closeAllFiles() finished&lt;br/&gt;
Thu Jun  9 11:51:02 dbexit: really exiting now&lt;/p&gt;
</comment>
                            <comment id="36796" author="eliot" created="Thu, 9 Jun 2011 04:22:55 +0000"  >&lt;p&gt;Can you try the 1.8 nightly tomorrow?&lt;/p&gt;</comment>
                            <comment id="36795" author="auto" created="Thu, 9 Jun 2011 04:22:43 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{u&apos;login&apos;: u&apos;erh&apos;, u&apos;name&apos;: u&apos;Eliot Horowitz&apos;, u&apos;email&apos;: u&apos;eliot@10gen.com&apos;}
&lt;p&gt;Message: try to fix numa segfault &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-3212&quot; title=&quot;Got signal: 11 (Segmentation fault)&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-3212&quot;&gt;&lt;del&gt;SERVER-3212&lt;/del&gt;&lt;/a&gt;&lt;br/&gt;
Branch: v1.8&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/959500ba9977891b6a6d4736615d1ae5bf22d2c2&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/959500ba9977891b6a6d4736615d1ae5bf22d2c2&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="36794" author="auto" created="Thu, 9 Jun 2011 04:21:39 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{u&apos;login&apos;: u&apos;erh&apos;, u&apos;name&apos;: u&apos;Eliot Horowitz&apos;, u&apos;email&apos;: u&apos;eliot@10gen.com&apos;}
&lt;p&gt;Message: try to fix numa segfault &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-3212&quot; title=&quot;Got signal: 11 (Segmentation fault)&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-3212&quot;&gt;&lt;del&gt;SERVER-3212&lt;/del&gt;&lt;/a&gt;&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/c5b9318b6d8100fd264fff49aae4a0e333507b17&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/c5b9318b6d8100fd264fff49aae4a0e333507b17&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="36793" author="eliot" created="Thu, 9 Jun 2011 04:10:58 +0000"  >&lt;p&gt;Can you send a stack from 1.8.3-rc3&lt;/p&gt;</comment>
                            <comment id="36663" author="kamaradclimber" created="Wed, 8 Jun 2011 09:42:27 +0000"  >&lt;p&gt;same issue with 1.8.2-rc3 (CentOs 5 64bits)&lt;/p&gt;

&lt;p&gt;edit : confirmed that it is specific to 1.8.2-rc3 (1.8.1 works).&lt;/p&gt;</comment>
                            <comment id="36634" author="paulgao" created="Wed, 8 Jun 2011 05:54:19 +0000"  >&lt;p&gt;I see github history, guess url -&amp;gt; &lt;a href=&quot;http://fastdl.mongodb.org/linux/mongodb-linux-x86_64-1.8.2.tgz&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;http://fastdl.mongodb.org/linux/mongodb-linux-x86_64-1.8.2.tgz&lt;/a&gt; &lt;img class=&quot;emoticon&quot; src=&quot;https://jira.mongodb.org/images/icons/emoticons/smile.png&quot; height=&quot;16&quot; width=&quot;16&quot; align=&quot;absmiddle&quot; alt=&quot;&quot; border=&quot;0&quot;/&gt;&lt;/p&gt;</comment>
                            <comment id="36625" author="eliot" created="Wed, 8 Jun 2011 05:23:23 +0000"  >&lt;p&gt;What version is this with?&lt;br/&gt;
1.8.2 isn&apos;t out yet - so can&apos;t be 1.8.2&lt;/p&gt;</comment>
                    </comments>
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                                                                <inwardlinks description="is duplicated by">
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                <attachments>
                            <attachment id="12057" name="numa_maps" size="6167" author="kamaradclimber" created="Thu, 9 Jun 2011 15:55:44 +0000"/>
                            <attachment id="12097" name="numa_maps_mongodb" size="3814" author="kamaradclimber" created="Mon, 20 Jun 2011 07:16:41 +0000"/>
                            <attachment id="12096" name="numa_maps_mongodb" size="3814" author="kamaradclimber" created="Mon, 20 Jun 2011 07:16:08 +0000"/>
                            <attachment id="12092" name="numa_maps_mongodb" size="6013" author="grmblfrz" created="Sat, 18 Jun 2011 12:11:26 +0000"/>
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