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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
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<item>
            <title>[SERVER-34922] mongofiles sharded cluster write concern test regression in MongoDB 3.7</title>
                <link>https://jira.mongodb.org/browse/SERVER-34922</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;Recent tools Evergreen tests have started showing a failure in the mongofiles_write_concern_mongos.js test when run against a 3.7 nightly.  Nothing relating to mongofiles changed in the tools during the time the failures started and the tests pass when run against MongoDB 3.6.&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;&lt;a href=&quot;https://evergreen.mongodb.com/task/mongo_tools_ubuntu1404_qa_tests_unstable_623b751c5f7b99c07021401283a5968eeeb0d9d0_18_05_04_18_59_32&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;Failing test&lt;/a&gt; (against server v3.7.9-154-g51dce76):&lt;/li&gt;
&lt;/ul&gt;


&lt;ul&gt;
	&lt;li&gt;&lt;a href=&quot;https://evergreen.mongodb.com/task/mongo_tools_ubuntu1404_qa_tests_unstable_7b16532d4653bcfcb5b3c919c7610cca8035af04_18_04_26_03_09_58&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;Passing test&lt;/a&gt; (against server v3.7.3-468-gb299eab):&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;The test case has 2 nodes of a 3-node shard down, but mongofiles is run with &lt;tt&gt;w:1,wtimeout:10000&lt;/tt&gt;.  In the failing case, mongofiles hangs waiting for a database response.   Eventually, after several hours, the process is terminated.&lt;/p&gt;

&lt;p&gt;Note: The mongofiles log output is deceptive, it claims the file is added, but the hang occurs during a deferred close() call when mgo is trying to flush all data to the database and ensure indexes exist.&lt;/p&gt;</description>
                <environment>Ubuntu 14.04</environment>
        <key id="541668">SERVER-34922</key>
            <summary>mongofiles sharded cluster write concern test regression in MongoDB 3.7</summary>
                <type id="1" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14703&amp;avatarType=issuetype">Bug</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="3">Duplicate</resolution>
                                        <assignee username="backlog-server-sharding">[DO NOT USE] Backlog - Sharding Team</assignee>
                                    <reporter username="david.golden@mongodb.com">David Golden</reporter>
                        <labels>
                    </labels>
                <created>Wed, 9 May 2018 18:45:40 +0000</created>
                <updated>Tue, 6 Dec 2022 03:29:55 +0000</updated>
                            <resolved>Mon, 23 Jul 2018 17:22:08 +0000</resolved>
                                    <version>3.6.6</version>
                    <version>4.1.1</version>
                                                    <component>Sharding</component>
                                        <votes>0</votes>
                                    <watches>7</watches>
                                                                                                                <comments>
                            <comment id="1953949" author="kaloian.manassiev" created="Mon, 23 Jul 2018 17:21:46 +0000"  >&lt;p&gt;Thanks for the analysis &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=blake.oler&quot; class=&quot;user-hover&quot; rel=&quot;blake.oler&quot;&gt;blake.oler&lt;/a&gt;. I am going to close this ticket as duplicate of &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-35092&quot; title=&quot;ShardServerCatalogCacheLoader should have a timeout waiting for read concern&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-35092&quot;&gt;&lt;del&gt;SERVER-35092&lt;/del&gt;&lt;/a&gt;, since it is essentially the same problem.&lt;/p&gt;</comment>
                            <comment id="1953693" author="blake.oler" created="Mon, 23 Jul 2018 15:11:57 +0000"  >&lt;p&gt;Two things here: &lt;/p&gt;

&lt;ol&gt;
	&lt;li&gt;To verify the database version of an unsharded database in a sharded cluster, we need to wait for linearizable read concern. This ensures that the catalog cache will have the latest data. So the general behavior is &quot;works as designed&quot; &amp;#8211; if a node in a cluster is partitioned from the other nodes, it will not be able to verify the database version.&lt;/li&gt;
	&lt;li&gt;However, the fact that this hangs indefinitely is not ideal. The call to waitForLinearizableReadConcern doesn&apos;t have any timeout associated with it. A reasonable timeout is behavior that needs to be added. It&apos;s tracked in &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-35092&quot; title=&quot;ShardServerCatalogCacheLoader should have a timeout waiting for read concern&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-35092&quot;&gt;&lt;del&gt;SERVER-35092&lt;/del&gt;&lt;/a&gt;.&lt;/li&gt;
&lt;/ol&gt;
</comment>
                            <comment id="1910513" author="louis.williams" created="Mon, 4 Jun 2018 21:08:49 +0000"  >&lt;p&gt;The problematic code is &lt;tt&gt;checkDbVersion&lt;/tt&gt; in &lt;a href=&quot;https://github.com/mongodb/mongo/blob/95d855d31b949cadf5047da16b5b8a623c4269f5/src/mongo/db/commands/create_indexes.cpp#L272&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;create_indexes.cpp&lt;/a&gt;, introduced in &lt;a href=&quot;https://github.com/mongodb/mongo/commit/d71d91cca86ac39b8964b442c41034599d3136ba&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;this commit&lt;/a&gt; as part of &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-34370&quot; title=&quot;Change commands to use AutoGetDb to get the database, triggering a DatabaseVersion check&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-34370&quot;&gt;&lt;del&gt;SERVER-34370&lt;/del&gt;&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="1910486" author="louis.williams" created="Mon, 4 Jun 2018 20:49:41 +0000"  >&lt;p&gt;Assigning to sharding&lt;/p&gt;</comment>
                            <comment id="1910485" author="louis.williams" created="Mon, 4 Jun 2018 20:49:13 +0000"  >&lt;p&gt;The hang is happening on createIndexes for&#160;&lt;tt&gt;dbOne.fs.chunks&lt;/tt&gt;.&lt;/p&gt;

&lt;p&gt;It looks the primary is waiting while refreshing the database entry in the catalog cache, which ignores the user&apos;s writeConcern.&lt;/p&gt;
&lt;p/&gt;
&lt;div id=&quot;syntaxplugin&quot; class=&quot;syntaxplugin&quot; style=&quot;border: 1px dashed #bbb; border-radius: 5px !important; overflow: auto; max-height: 30em;&quot;&gt;
&lt;table cellspacing=&quot;0&quot; cellpadding=&quot;0&quot; border=&quot;0&quot; width=&quot;100%&quot; style=&quot;font-size: 1em; line-height: 1.4em !important; font-weight: normal; font-style: normal; color: black;&quot;&gt;
		&lt;tbody &gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;2018-05-07T17:40:31.456+0000 s20515| 2018-05-07T17:40:31.455+0000 I COMMAND  [conn22] query dbOne.fs.files command: { insert: &quot;fs.files&quot;, writeConcern: { getLastError: 1, w: 1, wtimeout: 10000 }, ordered: true, $readPreference: { mode: &quot;nearest&quot; }, $db: &quot;dbOne&quot; } nShards:1 ninserted:1 numYields:0 reslen:185 120029ms&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;2018-05-07T17:40:31.457+0000 s20515| 2018-05-07T17:40:31.456+0000 D COMMAND  [conn22] createIndexes: dbOne.fs.chunks cmd:{ createIndexes: &quot;fs.chunks&quot;, indexes: [ { name: &quot;files_id_1_n_1&quot;, ns: &quot;dbOne.fs.chunks&quot;, key: { files_id: 1, n: 1 }, unique: true } ], $db: &quot;dbOne&quot; }&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;2018-05-07T17:40:31.457+0000 d20511| 2018-05-07T17:40:31.456+0000 I SHARDING [conn34] Refreshing cached database entry for dbOne; current cached database info is { _id: &quot;dbOne&quot;, primary: &quot;mongofiles_write_concern_mongos-rs0&quot;, partitioned: false, version: { uuid: UUID(&quot;33658558-44e2-462e-944f-93c133a8b31a&quot;), lastMod: 1 } }&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
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				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;2018-05-07T19:50:52.656+0000 s20515| 2018-05-07T19:50:52.641+0000 D -        [conn22] User Assertion: InterruptedAtShutdown: interrupted at shutdown src/mongo/db/operation_context.cpp 165&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;2018-05-07T19:50:52.657+0000 s20515| 2018-05-07T19:50:52.642+0000 I COMMAND  [conn22] query dbOne.fs.chunks command: { createIndexes: &quot;fs.chunks&quot;, indexes: [ { name: &quot;files_id_1_n_1&quot;, ns: &quot;dbOne.fs.chunks&quot;, key: { files_id: 1, n: 1 }, unique: true } ], $db: &quot;dbOne&quot; } numYields:0 reslen:587 7821186ms&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;2018-05-07T19:50:52.661+0000 d20511| 2018-05-07T19:50:52.645+0000 I SHARDING [conn34] Failed to refresh databaseVersion for database dbOne :: caused by :: ShutdownInProgress: Unable to schedule routing table update because this is not the majority primary and may not have the latest data. :: caused by :: Replication is being shut down&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;2018-05-07T19:50:52.661+0000 d20511| 2018-05-07T19:50:52.645+0000 I COMMAND  [conn34] command dbOne.$cmd command: createIndexes { createIndexes: &quot;fs.chunks&quot;, indexes: [ { name: &quot;files_id_1_n_1&quot;, ns: &quot;dbOne.fs.chunks&quot;, key: { files_id: 1, n: 1 }, unique: true } ], shardVersion: [ Timestamp(0, 0), ObjectId(&apos;000000000000000000000000&apos;) ], databaseVersion: { uuid: UUID(&quot;c918f944-1a83-40c0-b265-bd74d9d6dc2e&quot;), lastMod: 1 }, allowImplicitCollectionCreation: false, $clusterTime: { clusterTime: Timestamp(1525714831, 4), signature: { hash: BinData(0, 54CBBC2B100FA619FCDACAED9070E8857A02342C), keyId: 6552892982884827165 } }, $configServerState: { opTime: { ts: Timestamp(1525714831, 3), t: 1 } }, $db: &quot;dbOne&quot; } numYields:0 ok:0 errMsg:&quot;don&apos;t know dbVersion&quot; errName:StaleDbVersion errCode:249 reslen:475 locks:{ Global: { acquireCount: { r: 1, w: 1 } }, Database: { acquireCount: { W: 1 } } } protocol:op_msg 7821188ms&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
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&lt;p/&gt;</comment>
                            <comment id="1907579" author="david.golden" created="Thu, 31 May 2018 23:08:07 +0000"  >&lt;p&gt;This is still a problem as of mongodb-linux-x86_64-ubuntu1404-4.1.0-114-ga3fb68c&lt;/p&gt;</comment>
                            <comment id="1888424" author="david.golden" created="Thu, 10 May 2018 18:22:55 +0000"  >&lt;p&gt;Might be related to &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-34776&quot; title=&quot;dropDatabase should respect user provided writeConcern&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-34776&quot;&gt;&lt;del&gt;SERVER-34776&lt;/del&gt;&lt;/a&gt;&lt;/p&gt;</comment>
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