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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-35267] db on mounted GlusterFS remote filesystem causes kernel panic (task stuck for 120 seconds) during mongod shutdown</title>
                <link>https://jira.mongodb.org/browse/SERVER-35267</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;Running a mongo pod on Kubernetes (6 CentOS 7.4 nodes) with preStop command &lt;span class=&quot;error&quot;&gt;&amp;#91;&amp;quot;mongod&amp;quot;, &amp;quot;&#8211;shutdown&amp;quot;&amp;#93;&lt;/span&gt; and the db volume is mounted on a remote GlusterFS volume (with a subdir-mount option) using a PersistentVolume and a PV-Claim for the mongo deployment. The Gluster volume is striped onto 3 hosts without replicas and is mounted using the user-space (FUSE) client. All the nodes and the gluster hosts are setup to NTP their time from the same time servers.&lt;/p&gt;

&lt;p&gt;When the remote mount is empty, mongo starts, populates the directory, operates without errors and shuts down without errors.&lt;/p&gt;

&lt;p&gt;On second start, mongo will start without errors and operates without errors. On shutdown, mongo will log the event that WiredTiger is shutting down and after two minutes the host&apos;s kernel will panic with task mongod stuck for more than 120 seconds.&lt;/p&gt;

&lt;p&gt;3.6.0 using MMAPv1 works as intended. I previously had problems using GlusterFS volumes with replication for Elasticsearch storage (regarding the creation and access times on lock files), but none with striped volumes.&lt;/p&gt;</description>
                <environment>Kubernetes 1.9.5</environment>
        <key id="550584">SERVER-35267</key>
            <summary>db on mounted GlusterFS remote filesystem causes kernel panic (task stuck for 120 seconds) during mongod shutdown</summary>
                <type id="6" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14720&amp;avatarType=issuetype">Question</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="4">Incomplete</resolution>
                                        <assignee username="ramon.fernandez@mongodb.com">Ramon Fernandez Marina</assignee>
                                    <reporter username="ferhat.savci">Ferhat Savc?</reporter>
                        <labels>
                    </labels>
                <created>Tue, 29 May 2018 08:43:02 +0000</created>
                <updated>Mon, 23 Jul 2018 09:29:07 +0000</updated>
                            <resolved>Thu, 21 Jun 2018 00:54:54 +0000</resolved>
                                    <version>3.6.5</version>
                                                                        <votes>0</votes>
                                    <watches>8</watches>
                                                                                                                <comments>
                            <comment id="1926975" author="thomas.schubert" created="Thu, 21 Jun 2018 00:54:54 +0000"  >&lt;p&gt;Hi &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=ferhat.savci&quot; class=&quot;user-hover&quot; rel=&quot;ferhat.savci&quot;&gt;ferhat.savci&lt;/a&gt;,&lt;/p&gt;

&lt;p&gt;We haven&#8217;t heard back from you for some time, so I&#8217;m going to mark this ticket as resolved. If this is still an issue for you, please provide additional information and we will reopen the ticket.&lt;/p&gt;

&lt;p&gt;Regards,&lt;br/&gt;
Kelsey&lt;/p&gt;</comment>
                            <comment id="1914061" author="ramon.fernandez" created="Thu, 7 Jun 2018 17:17:04 +0000"  >&lt;p&gt;&lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=ferhat.savci&quot; class=&quot;user-hover&quot; rel=&quot;ferhat.savci&quot;&gt;ferhat.savci&lt;/a&gt;, there should not be any difference on the MongoDB side between the two shutdown events you mention, so this points to an issue with the underlying storage layer.&lt;/p&gt;

&lt;p&gt;Can you please collect &lt;tt&gt;gdb&lt;/tt&gt; stack traces during the shutdown process to see if they provide any useful information? I&apos;m attaching a shell script below that collects &lt;tt&gt;top&lt;/tt&gt;, &lt;tt&gt;iostat&lt;/tt&gt; and &lt;tt&gt;gdb&lt;/tt&gt; stack traces &amp;#8211; run it at the same time you initiate the shutdown on your &lt;tt&gt;mongod&lt;/tt&gt;.&lt;/p&gt;

&lt;p&gt;Thanks,&lt;br/&gt;
Ram&#243;n. &lt;/p&gt;

&lt;p/&gt;
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				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;   &lt;/span&gt;&lt;span style=&quot;color: #ff1493; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;echo&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; &lt;/span&gt;&lt;span style=&quot;color: blue; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;&quot;Sampling via gdb&quot;&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
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				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;   &lt;/span&gt;&lt;span style=&quot;color: #ff1493; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;sudo&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; gdb -p $1 -batch -ex &lt;/span&gt;&lt;span style=&quot;color: blue; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;&apos;thread apply all bt&apos;&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; &amp;gt; &lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;/tmp/&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;`&lt;/span&gt;&lt;span style=&quot;color: #ff1493; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;hostname&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; -f`-stacks&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;/stacks-&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;$(&lt;/span&gt;&lt;span style=&quot;color: #ff1493; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;date&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; &lt;/span&gt;&lt;span style=&quot;color: blue; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;&apos;+%Y-%m-%dT%H-%M-%S&apos;&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;).txt&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;   &lt;/span&gt;&lt;span style=&quot;color: #ff1493; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;sleep&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; $DELAY&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: #006699; font-weight: bold; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;done&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
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&lt;p/&gt;</comment>
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