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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-39971] findAndModify in sharded transactions and readConcern &#8220;majority&#8221; miss existing record</title>
                <link>https://jira.mongodb.org/browse/SERVER-39971</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;I created a sharded cluster with 1 mongos, 1 config server and three shards each with a single node replica set.&lt;/p&gt;

&lt;p&gt;I pre-load the data and the contended table in question has this index:&lt;/p&gt;
&lt;p/&gt;
&lt;div id=&quot;syntaxplugin&quot; class=&quot;syntaxplugin&quot; style=&quot;border: 1px dashed #bbb; border-radius: 5px !important; overflow: auto; max-height: 30em;&quot;&gt;
&lt;table cellspacing=&quot;0&quot; cellpadding=&quot;0&quot; border=&quot;0&quot; width=&quot;100%&quot; style=&quot;font-size: 1em; line-height: 1.4em !important; font-weight: normal; font-style: normal; color: black;&quot;&gt;
		&lt;tbody &gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;{D_W_ID:1,  D_ID:1, D_NEXT_O_ID:1, D_TAX:1}, {unique:true}&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
			&lt;/tbody&gt;
&lt;/table&gt;
&lt;/div&gt;
&lt;p/&gt;
&lt;p&gt;in addition to _id index. The collection is sharded with shard key&lt;/p&gt;
&lt;p/&gt;
&lt;div id=&quot;syntaxplugin&quot; class=&quot;syntaxplugin&quot; style=&quot;border: 1px dashed #bbb; border-radius: 5px !important; overflow: auto; max-height: 30em;&quot;&gt;
&lt;table cellspacing=&quot;0&quot; cellpadding=&quot;0&quot; border=&quot;0&quot; width=&quot;100%&quot; style=&quot;font-size: 1em; line-height: 1.4em !important; font-weight: normal; font-style: normal; color: black;&quot;&gt;
		&lt;tbody &gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; {D_W_ID:1, D_ID:1} &lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
			&lt;/tbody&gt;
&lt;/table&gt;
&lt;/div&gt;
&lt;p/&gt;
&lt;p&gt;The following two contended operations start majority of transactions:&lt;/p&gt;
&lt;p/&gt;
&lt;div id=&quot;syntaxplugin&quot; class=&quot;syntaxplugin&quot; style=&quot;border: 1px dashed #bbb; border-radius: 5px !important; overflow: auto; max-height: 30em;&quot;&gt;
&lt;table cellspacing=&quot;0&quot; cellpadding=&quot;0&quot; border=&quot;0&quot; width=&quot;100%&quot; style=&quot;font-size: 1em; line-height: 1.4em !important; font-weight: normal; font-style: normal; color: black;&quot;&gt;
		&lt;tbody &gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;db.coll.findAndModify({D_W_ID:1, D_ID:1}, /* query */&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;     {$inc:{D_NEXT_O_ID:1}}, /* update */&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;     {sort:{D_NEXT_O_ID:-1}}, /* sort */&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;     {fields:{_id:0, D_NEXT_O_ID:1, D_TAX:1}}, /* projection */&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;     {new:false}&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;});&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;Ddb.coll.findAndModify({D_W_ID:1, D_ID:1}, /* query */&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;     {$inc:{D_SOMEOTHER_FIELD:1}} /* update */&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;});&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
			&lt;/tbody&gt;
&lt;/table&gt;
&lt;/div&gt;
&lt;p/&gt;
&lt;p&gt;With readConcern &#8220;majority&#8221; every once in a while one of these two findAndModify commands matches 0 documents, which is impossible.&lt;/p&gt;

&lt;p&gt;&#160;&lt;/p&gt;

&lt;p&gt;There are no inserts, deletes or balancing happening to this collection, only lots of findAndModify and a very occasional find.&lt;/p&gt;</description>
                <environment></environment>
        <key id="710352">SERVER-39971</key>
            <summary>findAndModify in sharded transactions and readConcern &#8220;majority&#8221; miss existing record</summary>
                <type id="1" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14703&amp;avatarType=issuetype">Bug</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="13203">Gone away</resolution>
                                        <assignee username="asya.kamsky@mongodb.com">Asya Kamsky</assignee>
                                    <reporter username="asya.kamsky@mongodb.com">Asya Kamsky</reporter>
                        <labels>
                    </labels>
                <created>Tue, 5 Mar 2019 22:19:02 +0000</created>
                <updated>Fri, 27 Oct 2023 20:42:56 +0000</updated>
                            <resolved>Thu, 11 Apr 2019 01:52:56 +0000</resolved>
                                                                                        <votes>0</votes>
                                    <watches>13</watches>
                                                                                                                <comments>
                            <comment id="2209067" author="asya" created="Thu, 11 Apr 2019 01:52:56 +0000"  >&lt;p&gt;Gone away as a result of &lt;a href=&quot;https://jira.mongodb.org/browse/WT-4537&quot; title=&quot;Fix WiredTiger cursor prev/next traversal failure on prepare retry&quot; class=&quot;issue-link&quot; data-issue-key=&quot;WT-4537&quot;&gt;&lt;del&gt;WT-4537&lt;/del&gt;&lt;/a&gt; being fixed.&lt;/p&gt;</comment>
                            <comment id="2197600" author="kaloian.manassiev" created="Mon, 1 Apr 2019 14:01:09 +0000"  >&lt;p&gt;Oh I wasn&apos;t sure if 4.1.9 is out yet or not, that&apos;s why I said latest nightly. We can close it then, thanks Asya.&lt;/p&gt;</comment>
                            <comment id="2197540" author="asya" created="Mon, 1 Apr 2019 13:15:11 +0000"  >&lt;p&gt;I tried with 4.1.9 and I couldn&#8217;t.  Should I try again with nightly?  I assumed that the previously suspected issue that was fixed in 4.1.9 was it. &lt;/p&gt;</comment>
                            <comment id="2197505" author="kaloian.manassiev" created="Mon, 1 Apr 2019 12:38:42 +0000"  >&lt;p&gt;&lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=asya&quot; class=&quot;user-hover&quot; rel=&quot;asya&quot;&gt;asya&lt;/a&gt;, can you try to reproduce this on the latest nightly build?&lt;/p&gt;</comment>
                            <comment id="2180388" author="asya" created="Thu, 14 Mar 2019 00:04:55 +0000"  >&lt;p&gt;It looks like that&#8217;s fixed in 4.1.9 - once that&#8217;s out I can try to reproduce and if I cannot then can close this resolved as duplicate.&lt;/p&gt;</comment>
                            <comment id="2175915" author="tess.avitabile" created="Fri, 8 Mar 2019 16:51:26 +0000"  >&lt;p&gt;This could be related to &lt;a href=&quot;https://jira.mongodb.org/browse/WT-4537&quot; title=&quot;Fix WiredTiger cursor prev/next traversal failure on prepare retry&quot; class=&quot;issue-link&quot; data-issue-key=&quot;WT-4537&quot;&gt;&lt;del&gt;WT-4537&lt;/del&gt;&lt;/a&gt;.&lt;/p&gt;</comment>
                            <comment id="2171909" author="asya" created="Tue, 5 Mar 2019 22:50:20 +0000"  >&lt;p&gt;Here are some typical log lines:&lt;/p&gt;
&lt;p/&gt;
&lt;div id=&quot;syntaxplugin&quot; class=&quot;syntaxplugin&quot; style=&quot;border: 1px dashed #bbb; border-radius: 5px !important; overflow: auto; max-height: 30em;&quot;&gt;
&lt;table cellspacing=&quot;0&quot; cellpadding=&quot;0&quot; border=&quot;0&quot; width=&quot;100%&quot; style=&quot;font-size: 1em; line-height: 1.4em !important; font-weight: normal; font-style: normal; color: black;&quot;&gt;
		&lt;tbody &gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;command tpcc.DISTRICT command: findAndModify { findAndModify: &quot;DISTRICT&quot;, query: { D_ID: 2, D_W_ID: 2, $comment: &quot;NEW_ORDER&quot; }, new: false, update: { $inc: { D_NEXT_O_ID: 1 } }, fields: { D_ID: 1, D_W_ID: 1, _id: 0, D_NEXT_O_ID: 1, D_TAX: 1 }, sort: { NO_O_ID: 1 }, upsert: false, startTransaction: true, readConcern: { afterClusterTime: Timestamp(1551799426, 22), level: &quot;majority&quot; }, txnNumber: 2, autocommit: false, $queryOptions: { $readPreference: { mode: &quot;primary&quot; } }, shardVersion: [ Timestamp(2, 0), ObjectId(&apos;5c7e934bdf239651bf93d780&apos;) ], coordinator: true, lsid: { id: UUID(&quot;cbf83769-6e90-46bc-b083-b0b5986f8cc0&quot;), uid: BinData(0, E3B0C44298FC1C149AFBF4C8996FB92427AE41E4649B934CA495991B7852B855) }, $clusterTime: { clusterTime: Timestamp(1551799426, 61), signature: { hash: BinData(0, 667E34F25B54FC8688388B173D454147E40A4469), keyId: 6664925521173807120 } }, $client: { driver: { name: &quot;PyMongo&quot;, version: &quot;3.7.2&quot; }, os: { type: &quot;Linux&quot;, name: &quot;Ubuntu 16.04 xenial&quot;, architecture: &quot;x86_64&quot;, version: &quot;4.15.0-1017-gcp&quot; }, platform: &quot;CPython 2.7.12.final.0&quot;, mongos: { host: &quot;tpcc-client-2:30000&quot;, client: &quot;127.0.0.1:45174&quot;, version: &quot;4.1.8&quot; } }, $configServerState: { opTime: { ts: Timestamp(1551799419, 501), t: 1 } }, $db: &quot;tpcc&quot; } planSummary: IXSCAN { D_W_ID: 1, D_ID: 1, D_NEXT_O_ID: 1, D_TAX: 1 } keysExamined:0 docsExamined:0 hasSortStage:1 nMatched:0 nModified:0 prepareReadConflicts:14 numYields:0 queryHash:CE1281A6 planCacheKey:AC5F2BA9 reslen:387 locks:{} protocol:op_msg 47ms&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&amp;nbsp;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;command tpcc.DISTRICT command: findAndModify { findAndModify: &quot;DISTRICT&quot;, query: { D_ID: 10, D_W_ID: 3, $comment: &quot;PAYMENT&quot; }, new: false, update: { $inc: { D_YTD: 4402.88 } }, fields: { D_NAME: 1, D_STREET_1: 1, D_ZIP: 1, D_STATE: 1, D_CITY: 1, D_STREET_2: 1 }, upsert: false, startTransaction: true, readConcern: { level: &quot;majority&quot; }, txnNumber: 2, autocommit: false, $queryOptions: { $readPreference: { mode: &quot;primary&quot; } }, shardVersion: [ Timestamp(3, 0), ObjectId(&apos;5c7edf3721787375ddde6f6d&apos;) ], coordinator: true, lsid: { id: UUID(&quot;7b8fd330-746a-471e-90e5-f4ebb1c2a79c&quot;), uid: BinData(0, E3B0C44298FC1C149AFBF4C8996FB92427AE41E4649B934CA495991B7852B855) }, $clusterTime: { clusterTime: Timestamp(1551819049, 34), signature: { hash: BinData(0, 6602C30F1E7C8387BF65C0866E2818512836FF73), keyId: 6664982283461591069 } }, $client: { driver: { name: &quot;PyMongo&quot;, version: &quot;3.7.2&quot; }, os: { type: &quot;Linux&quot;, name: &quot;Ubuntu 16.04 xenial&quot;, architecture: &quot;x86_64&quot;, version: &quot;4.15.0-1017-gcp&quot; }, platform: &quot;CPython 2.7.12.final.0&quot;, mongos: { host: &quot;tpcc-client-2:30000&quot;, client: &quot;127.0.0.1:45586&quot;, version: &quot;4.1.8&quot; } }, $configServerState: { opTime: { ts: Timestamp(1551819048, 1), t: 1 } }, $db: &quot;tpcc&quot; } planSummary: IXSCAN { D_W_ID: 1, D_ID: 1, D_NEXT_O_ID: 1, D_TAX: 1 } keysExamined:0 docsExamined:0 nMatched:0 nModified:0 prepareReadConflicts:1 numYields:0 queryHash:A1074DDB planCacheKey:1EFA745D reslen:387 locks:{} protocol:op_msg 34ms &lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
			&lt;/tbody&gt;
&lt;/table&gt;
&lt;/div&gt;
&lt;p/&gt;</comment>
                    </comments>
                <issuelinks>
                            <issuelinktype id="10010">
                    <name>Duplicate</name>
                                            <outwardlinks description="duplicates">
                                        <issuelink>
            <issuekey id="675049">WT-4537</issuekey>
        </issuelink>
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