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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-43399] Add logging to DeleteOpIsIdBased test to debug rare test hang in waitForAllEarlierOplogWritesToBeVisible</title>
                <link>https://jira.mongodb.org/browse/SERVER-43399</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;A hang was observed in the DeleteOpIsIdBased unittest in repltests.cpp. The test performs several deletes (which create delete oplog entries) and immediately queries the oplog, triggering a call to&#160;waitForAllEarlierOplogWritesToBeVisible. The stack trace is approximately:&lt;/p&gt;
&lt;p/&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;Thread 1: &quot;testsuite&quot; (Thread 0x7fdf3e0f7ac0 (LWP 67799))&lt;/span&gt;&lt;/pre&gt;
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						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; .&lt;/span&gt;&lt;/pre&gt;
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				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;#10 0x000055f6e9f94225 in mongo::Interruptible::waitForConditionOrInterrupt&lt;/span&gt;&lt;/pre&gt;
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		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;#11 mongo::WiredTigerOplogManager::waitForAllEarlierOplogWritesToBeVisible&lt;/span&gt;&lt;/pre&gt;
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				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; .&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;#16 0x000055f6eb3e54fb in mongo::(anonymous namespace)::FindCmd::Invocation::run&lt;/span&gt;&lt;/pre&gt;
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						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; .&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;#28 0x000055f6e97c822d in ReplTests::Base::applyAllOperations&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;#29 0x000055f6e9824b59 in ReplTests::DeleteOpIsIdBased::run &lt;/span&gt;&lt;/pre&gt;
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&lt;/div&gt;
&lt;p/&gt;
&lt;p&gt;This hang was observed approximately once in Evergreen. It seems likely to be a race involving the&#160;WTOplogJournalThread and the main thread, where the main thread is expecting the&#160;WTOplogJournalThread to call&#160;_setOplogReadTimestamp but it already has / never does. As &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=lingzhi.deng&quot; class=&quot;user-hover&quot; rel=&quot;lingzhi.deng&quot;&gt;lingzhi.deng&lt;/a&gt; showed me, it may be because&#160;waitForAllEarlierOplogWritesToBeVisible increments&#160;_opsWaitingForVisibility tell this thread that someone is waiting for it, but the thread checks a different member, _opsWaitingForJournal, to determine if there are any waiters.&lt;/p&gt;</description>
                <environment></environment>
        <key id="933615">SERVER-43399</key>
            <summary>Add logging to DeleteOpIsIdBased test to debug rare test hang in waitForAllEarlierOplogWritesToBeVisible</summary>
                <type id="1" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14703&amp;avatarType=issuetype">Bug</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="13201">Fixed</resolution>
                                        <assignee username="jesse@mongodb.com">A. Jesse Jiryu Davis</assignee>
                                    <reporter username="jesse@mongodb.com">A. Jesse Jiryu Davis</reporter>
                        <labels>
                    </labels>
                <created>Fri, 20 Sep 2019 18:47:15 +0000</created>
                <updated>Sun, 29 Oct 2023 22:17:04 +0000</updated>
                            <resolved>Thu, 17 Oct 2019 16:09:54 +0000</resolved>
                                                    <fixVersion>4.3.1</fixVersion>
                                    <component>Replication</component>
                                        <votes>0</votes>
                                    <watches>6</watches>
                                                                                                                <comments>
                            <comment id="2485719" author="xgen-internal-githook" created="Wed, 16 Oct 2019 20:51:12 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;name&apos;: &apos;A. Jesse Jiryu Davis&apos;, &apos;username&apos;: &apos;ajdavis&apos;, &apos;email&apos;: &apos;jesse@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-43399&quot; title=&quot;Add logging to DeleteOpIsIdBased test to debug rare test hang in waitForAllEarlierOplogWritesToBeVisible&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-43399&quot;&gt;&lt;del&gt;SERVER-43399&lt;/del&gt;&lt;/a&gt; Log more in DeleteOpIsIdBased test&lt;/p&gt;

&lt;p&gt;Also clean up unused function in repltests.cpp.&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/8b32d754d7e12a11e8d4a8479312f9169147e22e&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/8b32d754d7e12a11e8d4a8479312f9169147e22e&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2467088" author="matthew.russotto" created="Fri, 4 Oct 2019 18:36:28 +0000"  >&lt;p&gt;I think BF-14344 is the same.  In that case, both primary and secondary were stuck at the same timestamp.&lt;/p&gt;</comment>
                            <comment id="2466909" author="matthew.russotto" created="Fri, 4 Oct 2019 17:18:16 +0000"  >&lt;p&gt;BF-14344 shows a node in this state, though I don&apos;t know if it causes this BF.  (It&apos;s not waiting for oplog writes, but lastVisible is not advancing)&lt;/p&gt;</comment>
                            <comment id="2427314" author="jesse" created="Sat, 21 Sep 2019 13:22:32 +0000"  >&lt;p&gt;Thanks. Yes, we verified that code is run when the test writes two oplog entries.&lt;/p&gt;</comment>
                            <comment id="2427308" author="daniel.gottlieb@10gen.com" created="Sat, 21 Sep 2019 12:39:16 +0000"  >&lt;p&gt;FWIW, this is the code that &lt;a href=&quot;https://github.com/mongodb/mongo/blob/0ab1e3d4a143625ea4fbf5033eb869994d8b1fb0/src/mongo/db/storage/wiredtiger/wiredtiger_recovery_unit.cpp#L363-L371&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;triggers a journal flush&lt;/a&gt; on transaction completion.&lt;/p&gt;</comment>
                            <comment id="2427159" author="jesse" created="Fri, 20 Sep 2019 21:45:46 +0000"  >&lt;p&gt;If we disable the&#160;WTOplogJournalThread in the test, then it hangs similarly to how it hung in the build failure, so the thread is definitely critical for the test to complete. It seems like this line in the test:&lt;/p&gt;
&lt;p/&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;_client.remove(ns(), BSON(&quot;a&quot; &amp;lt;&amp;lt; 10)); &lt;/span&gt;&lt;/pre&gt;
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&lt;p/&gt;
&lt;p&gt;... ought to cause a journal flush which would advance the visible timestamp, so this line in&#160;waitForAllEarlierOplogWritesToBeVisible:&lt;/p&gt;
&lt;p/&gt;
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&lt;p/&gt;
&lt;p&gt;... should return true and finish waiting. It appears like the visible timestamp wasn&apos;t advanced, however. One solution might just be to increase the log level for this test to get more info if it fails again.&lt;/p&gt;</comment>
                    </comments>
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                                        <issuelink>
            <issuekey id="978487">SERVER-44196</issuekey>
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