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    <title>MongoDB Jira</title>
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    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-46048] Prepared transactions should block if any single-phase index builds are in progress </title>
                <link>https://jira.mongodb.org/browse/SERVER-46048</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;Prepared transactions and two-phase index builds can coexist during secondary oplog application (see &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-43638&quot; title=&quot;Do not block prepared transactions on two-phase index builds on secondaries&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-43638&quot;&gt;&lt;del&gt;SERVER-43638&lt;/del&gt;&lt;/a&gt;), however single-phase index builds cannot (see&#160;&lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-38588&quot; title=&quot;Hybrid index builds do not work when applied concurrently with prepared transactions on secondaries&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-38588&quot;&gt;&lt;del&gt;SERVER-38588&lt;/del&gt;&lt;/a&gt;).&#160;&lt;/p&gt;

&lt;p&gt;The logic to that determines whether to block &lt;a href=&quot;https://github.com/mongodb/mongo/blob/1d0eac80c06f6fabdccaaa77d985f283192f94a9/src/mongo/db/repl/transaction_oplog_application.cpp#L366&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;checks the system&apos;s ability to support two-phase index builds&lt;/a&gt;. This is not completely correct, because it may be possible for index builds to operation in single-phase mode even if two-phase index builds are supported.&lt;/p&gt;

&lt;p&gt;This will lead to potential index inconsistencies in line with &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-38588&quot; title=&quot;Hybrid index builds do not work when applied concurrently with prepared transactions on secondaries&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-38588&quot;&gt;&lt;del&gt;SERVER-38588&lt;/del&gt;&lt;/a&gt;.&lt;/p&gt;</description>
                <environment></environment>
        <key id="1139579">SERVER-46048</key>
            <summary>Prepared transactions should block if any single-phase index builds are in progress </summary>
                <type id="1" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14703&amp;avatarType=issuetype">Bug</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="13201">Fixed</resolution>
                                        <assignee username="benety.goh@mongodb.com">Benety Goh</assignee>
                                    <reporter username="louis.williams@mongodb.com">Louis Williams</reporter>
                        <labels>
                    </labels>
                <created>Fri, 7 Feb 2020 21:20:48 +0000</created>
                <updated>Sun, 29 Oct 2023 22:12:23 +0000</updated>
                            <resolved>Wed, 11 Mar 2020 10:01:43 +0000</resolved>
                                                    <fixVersion>4.4.0-rc0</fixVersion>
                    <fixVersion>4.7.0</fixVersion>
                                                        <votes>0</votes>
                                    <watches>3</watches>
                                                                                                                <comments>
                            <comment id="2968824" author="xgen-internal-githook" created="Wed, 11 Mar 2020 19:44:57 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;username&apos;: &apos;benety&apos;, &apos;name&apos;: &apos;Benety Goh&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; block prepared transactions on single-phased index builds on secondaries&lt;/p&gt;

&lt;p&gt;(cherry picked from commit 3af11010c3efe00f4fc3304de7a6b101db218e60)&lt;br/&gt;
Branch: v4.4&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/bd00f8ebf1025840f95fa144fbd1d8b9cad1f8ab&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/bd00f8ebf1025840f95fa144fbd1d8b9cad1f8ab&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2968036" author="xgen-internal-githook" created="Wed, 11 Mar 2020 16:46:45 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;username&apos;: &apos;benety&apos;, &apos;name&apos;: &apos;Benety Goh&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; remove unnecessary text log search from js test&lt;/p&gt;

&lt;p&gt;(cherry picked from commit db557f20e03c91590ab3f6178bdcce2d327c7235)&lt;br/&gt;
Branch: v4.4&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/cdb9c945a6e31eb0e0e97b249199953a87d9f905&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/cdb9c945a6e31eb0e0e97b249199953a87d9f905&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2967150" author="xgen-internal-githook" created="Wed, 11 Mar 2020 16:35:55 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;username&apos;: &apos;benety&apos;, &apos;name&apos;: &apos;Benety Goh&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; IndexBuildsCoordinator::inProgForCollection() allows filtering on single/two phase index builds in a collection&lt;/p&gt;

&lt;p&gt;(cherry picked from commit 588531744dcb3da7ab811da297cb53d62a21add6)&lt;br/&gt;
Branch: v4.4&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/83aa04ce7935f1a97389d14cae1ec26dcb32584d&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/83aa04ce7935f1a97389d14cae1ec26dcb32584d&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2967049" author="xgen-internal-githook" created="Wed, 11 Mar 2020 16:21:46 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;name&apos;: &apos;Benety Goh&apos;, &apos;username&apos;: &apos;benety&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; IndexBuildsCoordinator::awaitNoIndexBuildInProgressForCollection() supports waiting on a one type of index builds (single/two phased)&lt;/p&gt;

&lt;p&gt;(cherry picked from commit 0d0a968cad781532ab3f01acf690fda387fc5c47)&lt;br/&gt;
Branch: v4.4&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/0edc43bcd6fc5adfd8330347270f73757aa8031f&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/0edc43bcd6fc5adfd8330347270f73757aa8031f&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2966958" author="xgen-internal-githook" created="Wed, 11 Mar 2020 15:57:38 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;username&apos;: &apos;benety&apos;, &apos;name&apos;: &apos;Benety Goh&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; add IndexBuildsCoordinator::_filterIndexBuilds_inlock()&lt;/p&gt;

&lt;p&gt;(cherry picked from commit b1c7fcda2ec1fbb77430fb66898561ba59e86413)&lt;br/&gt;
Branch: v4.4&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/270e7e2f28d0e1c09318f49c3d2f839a1c3871d0&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/270e7e2f28d0e1c09318f49c3d2f839a1c3871d0&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2962276" author="xgen-internal-githook" created="Tue, 10 Mar 2020 22:10:10 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;name&apos;: &apos;Benety Goh&apos;, &apos;username&apos;: &apos;benety&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; block prepared transactions on single-phased index builds on secondaries&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/3af11010c3efe00f4fc3304de7a6b101db218e60&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/3af11010c3efe00f4fc3304de7a6b101db218e60&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2961991" author="xgen-internal-githook" created="Tue, 10 Mar 2020 20:46:54 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;username&apos;: &apos;benety&apos;, &apos;name&apos;: &apos;Benety Goh&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; remove unnecessary text log search from js test&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/db557f20e03c91590ab3f6178bdcce2d327c7235&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/db557f20e03c91590ab3f6178bdcce2d327c7235&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2961839" author="xgen-internal-githook" created="Tue, 10 Mar 2020 19:46:55 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;username&apos;: &apos;benety&apos;, &apos;name&apos;: &apos;Benety Goh&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; IndexBuildsCoordinator::inProgForCollection() allows filtering on single/two phase index builds in a collection&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/588531744dcb3da7ab811da297cb53d62a21add6&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/588531744dcb3da7ab811da297cb53d62a21add6&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2961466" author="xgen-internal-githook" created="Tue, 10 Mar 2020 18:39:46 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;name&apos;: &apos;Benety Goh&apos;, &apos;username&apos;: &apos;benety&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; IndexBuildsCoordinator::awaitNoIndexBuildInProgressForCollection() supports waiting on a one type of index builds (single/two phased)&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/0d0a968cad781532ab3f01acf690fda387fc5c47&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/0d0a968cad781532ab3f01acf690fda387fc5c47&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2961418" author="xgen-internal-githook" created="Tue, 10 Mar 2020 18:16:24 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;name&apos;: &apos;Benety Goh&apos;, &apos;username&apos;: &apos;benety&apos;, &apos;email&apos;: &apos;benety@mongodb.com&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-46048&quot; title=&quot;Prepared transactions should block if any single-phase index builds are in progress &quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-46048&quot;&gt;&lt;del&gt;SERVER-46048&lt;/del&gt;&lt;/a&gt; add IndexBuildsCoordinator::_filterIndexBuilds_inlock()&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/b1c7fcda2ec1fbb77430fb66898561ba59e86413&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/b1c7fcda2ec1fbb77430fb66898561ba59e86413&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="2946204" author="benety.goh" created="Thu, 5 Mar 2020 18:05:45 +0000"  >&lt;p&gt;I looked at the internal subsystems that still build indexes outside the IndexBuildsCoordinator and these systems use the two-phased index build method:&lt;/p&gt;
&lt;ul&gt;
	&lt;li&gt;sharding - movePrimary&lt;/li&gt;
	&lt;li&gt;sharding - &lt;a href=&quot;https://github.com/mongodb/mongo/blob/fceaea11f2b558135a28fb3ef66d87a3d1389a26/src/mongo/db/s/clone_catalog_data_command.cpp#L54&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;_shardsvrCloneCatalogData/_cloneCatalogData&lt;/a&gt;&lt;/li&gt;
	&lt;li&gt;&lt;a href=&quot;https://github.com/mongodb/mongo/blob/fceaea11f2b558135a28fb3ef66d87a3d1389a26/src/mongo/db/system_index.cpp#L91&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;system indexes&lt;/a&gt;&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;As a defensive measure, the check to block prepared transactions should still be modified to check for the presence of single-phased index builds managed by the IndexBuildsCoordinator.&lt;/p&gt;</comment>
                            <comment id="2943576" author="milkie" created="Thu, 5 Mar 2020 14:01:21 +0000"  >&lt;p&gt;Do we still have a single-phase path today on secondaries for non-empty collections?&lt;/p&gt;

&lt;p&gt;If so, we&apos;ll need a way to determine if in-progress index builds are single-phase (I think we can query the index builds manager for this info?), and then use the code that is in 4.2 to block prepared transactions on secondaries:&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/c9bdb7e64265bf36cb3ca81edd8cb36ed0589a04&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/c9bdb7e64265bf36cb3ca81edd8cb36ed0589a04&lt;/a&gt;&lt;/p&gt;</comment>
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