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<channel>
    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-4640] database corrupted  </title>
                <link>https://jira.mongodb.org/browse/SERVER-4640</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;we run mongod with journal. at run time we unmount disk and change disk setting. two thing happened.&lt;br/&gt;
 1. journal recovery take 15 min.&lt;br/&gt;
 2. database corrupted then rum validate command.&lt;/p&gt;

&lt;p&gt;please help me how to handle this problem in production.&lt;/p&gt;</description>
                <environment>linux debian</environment>
        <key id="27856">SERVER-4640</key>
            <summary>database corrupted  </summary>
                <type id="6" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14720&amp;avatarType=issuetype">Question</type>
                                            <priority id="2" iconUrl="https://jira.mongodb.org/images/icons/priorities/critical.svg">Critical - P2</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="9">Done</resolution>
                                        <assignee username="-1">Unassigned</assignee>
                                    <reporter username="jitendra908">jitendra</reporter>
                        <labels>
                            <label>crash</label>
                    </labels>
                <created>Fri, 6 Jan 2012 17:49:52 +0000</created>
                <updated>Fri, 30 Mar 2012 14:26:55 +0000</updated>
                            <resolved>Sun, 8 Jan 2012 13:51:31 +0000</resolved>
                                    <version>2.0.2</version>
                                                    <component>Querying</component>
                                        <votes>0</votes>
                                    <watches>3</watches>
                                                                                                                <comments>
                            <comment id="80094" author="eliot" created="Mon, 16 Jan 2012 14:20:23 +0000"  >&lt;p&gt;If it gets corrupted you should run --repair?&lt;br/&gt;
If you are running with journalling (default on 2.0.2, it should not get corrupted in the first place though)&lt;/p&gt;</comment>
                            <comment id="80038" author="jitendra908" created="Mon, 16 Jan 2012 10:57:03 +0000"  >&lt;p&gt;we have limited hard disk, we are not using replica. &lt;br/&gt;
if corruption take place then how to handle. &lt;/p&gt;</comment>
                            <comment id="78789" author="eliot" created="Tue, 10 Jan 2012 15:53:38 +0000"  >&lt;p&gt;If you get corruption you should either run repair or just wipe that member of the replica set and let it resync.&lt;br/&gt;
Very hard to tell if/what happened without any logs.&lt;/p&gt;</comment>
                            <comment id="78777" author="jitendra908" created="Tue, 10 Jan 2012 14:51:55 +0000"  >&lt;p&gt;once i have seen corruption on database.&lt;br/&gt;
it start to give error in insertion, i saw logs , it tell there is database corruption and u have to validate database.but we loss logs.&lt;br/&gt;
what should do when corruption take place.&lt;br/&gt;
1. we can run validate but it is too slow&lt;br/&gt;
2.if validate is false then run repair, it again slow command&lt;/p&gt;

&lt;p&gt;can you please give recommendation when corruption tale place &lt;/p&gt;
</comment>
                            <comment id="78517" author="eliot" created="Mon, 9 Jan 2012 13:52:28 +0000"  >&lt;p&gt;Why do you think there is corruption?&lt;/p&gt;</comment>
                            <comment id="78516" author="eliot" created="Mon, 9 Jan 2012 13:52:27 +0000"  >&lt;p&gt;Why do you think there is corruption?&lt;/p&gt;</comment>
                            <comment id="78515" author="eliot" created="Mon, 9 Jan 2012 13:52:26 +0000"  >&lt;p&gt;Why do you think there is corruption?&lt;/p&gt;</comment>
                            <comment id="78513" author="jitendra908" created="Mon, 9 Jan 2012 13:47:16 +0000"  >&lt;p&gt;that&apos;s clear. one more think database corruption.&lt;br/&gt;
1. Why does database corruption take place.&lt;br/&gt;
2. If database corruption happens , then how to handle it.   &lt;/p&gt;</comment>
                            <comment id="78419" author="eliot" created="Sun, 8 Jan 2012 13:51:22 +0000"  >&lt;p&gt;Given that it took 2 minutes to allocated a 1gb journal file - its clear the filesystem is an issue.&lt;br/&gt;
Journal recovery will be very fast unless the disk is very slow - so that&apos;s the only sensible explanation.  &lt;/p&gt;</comment>
                            <comment id="78410" author="jitendra908" created="Sun, 8 Jan 2012 11:12:59 +0000"  >&lt;p&gt;ok &lt;/p&gt;

&lt;p&gt;cam you pls explain  below logs recover take too much time because of file system or else.&lt;/p&gt;

&lt;p&gt;Fri Jan 6 13:44:37 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22582843 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan 6 13:44:38 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section more...&lt;br/&gt;
Fri Jan 6 13:54:46 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover /u01/shard3/master/journal/j._3&lt;br/&gt;
Fri Jan 6 14:02:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover cleaning up&lt;br/&gt;
Fri Jan 6 14:02:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; removeJournalFiles&lt;br/&gt;
Fri Jan 6 14:02:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover done&lt;/p&gt;</comment>
                            <comment id="78210" author="eliot" created="Fri, 6 Jan 2012 19:46:00 +0000"  >&lt;p&gt;Looks like the file system was very slow throughout that period.&lt;/p&gt;

&lt;p&gt;2 minutes to allocate 1 gb journal file is very very slow, and only file system is being used.&lt;/p&gt;</comment>
                            <comment id="78182" author="jitendra908" created="Fri, 6 Jan 2012 18:30:48 +0000"  >&lt;p&gt;hard disk on different physical location on san network . disk was faulty.&lt;br/&gt;
then recovery take time 16 minutes or server available after 22 min it is big problem.&lt;/p&gt;
&lt;ul&gt;
	&lt;li&gt;
	&lt;ul&gt;
		&lt;li&gt;
		&lt;ul&gt;
			&lt;li&gt;
			&lt;ul&gt;
				&lt;li&gt;
				&lt;ul&gt;
					&lt;li&gt;SERVER RESTARTED *****&lt;/li&gt;
				&lt;/ul&gt;
				&lt;/li&gt;
			&lt;/ul&gt;
			&lt;/li&gt;
		&lt;/ul&gt;
		&lt;/li&gt;
	&lt;/ul&gt;
	&lt;/li&gt;
&lt;/ul&gt;



&lt;p&gt;Fri Jan  6 13:44:31 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; MongoDB starting : pid=4477 port=20000 dbpath=/u01/shard3/master/ 64-bit host=ctxos-node-01&lt;br/&gt;
Fri Jan  6 13:44:31 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; db version v2.0.2, pdfile version 4.5&lt;br/&gt;
Fri Jan  6 13:44:31 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; git version: 514b122d308928517f5841888ceaa4246a7f18e3&lt;br/&gt;
Fri Jan  6 13:44:31 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; build info: Linux bs-linux64.10gen.cc 2.6.21.7-2.ec2.v1.2.fc8xen #1 SMP Fri Nov 20 17:48:28 EST 2009 x86_64 BOOST_LIB_VERSION=1_41&lt;br/&gt;
Fri Jan  6 13:44:31 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; options: &lt;/p&gt;
{ bind_ip: &quot;192.168.50.168&quot;, dbpath: &quot;/u01/shard3/master/&quot;, journalCommitInterval: 2, logappend: true, logpath: &quot;/usr/local/ct/depend/mongo/logs/mongod_20000.log&quot;, port: 20000, quiet: true, shardsvr: true }
&lt;p&gt;Fri Jan  6 13:44:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; journal dir=/u01/shard3/master/journal&lt;br/&gt;
Fri Jan  6 13:44:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover begin&lt;br/&gt;
Fri Jan  6 13:44:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover lsn: 42621633&lt;br/&gt;
Fri Jan  6 13:44:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover /u01/shard3/master/journal/j._2&lt;br/&gt;
Fri Jan  6 13:44:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22106183 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan  6 13:44:33 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22165763 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan  6 13:44:33 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22225343 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan  6 13:44:34 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22284933 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan  6 13:44:34 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22344533 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan  6 13:44:35 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22404113 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan  6 13:44:36 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22463683 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan  6 13:44:36 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22523273 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan  6 13:44:37 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section seq:22582843 &amp;lt; lsn:42621633&lt;br/&gt;
Fri Jan  6 13:44:38 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover skipping application of section more...&lt;br/&gt;
Fri Jan  6 13:54:46 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover /u01/shard3/master/journal/j._3&lt;br/&gt;
Fri Jan  6 14:02:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover cleaning up&lt;br/&gt;
Fri Jan  6 14:02:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; removeJournalFiles&lt;br/&gt;
Fri Jan  6 14:02:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; recover done&lt;br/&gt;
Fri Jan  6 14:02:55 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; preallocateIsFaster=true 432.26&lt;br/&gt;
Fri Jan  6 14:02:56 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; preallocateIsFaster=true 6.36&lt;br/&gt;
Fri Jan  6 14:03:21 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; preallocateIsFaster=true 50.2&lt;br/&gt;
Fri Jan  6 14:03:21 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; preallocateIsFaster check took 48.478 secs&lt;br/&gt;
Fri Jan  6 14:03:21 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; preallocating a journal file /u01/shard3/master/journal/prealloc.0&lt;br/&gt;
                136314880/1073741824    12%&lt;br/&gt;
                178257920/1073741824    16%&lt;br/&gt;
                209715200/1073741824    19%&lt;br/&gt;
                251658240/1073741824    23%&lt;br/&gt;
                283115520/1073741824    26%&lt;br/&gt;
                314572800/1073741824    29%&lt;br/&gt;
                377487360/1073741824    35%&lt;br/&gt;
                398458880/1073741824    37%&lt;br/&gt;
                429916160/1073741824    40%&lt;br/&gt;
                461373440/1073741824    42%&lt;br/&gt;
                482344960/1073741824    44%&lt;br/&gt;
                513802240/1073741824    47%&lt;br/&gt;
                545259520/1073741824    50%&lt;br/&gt;
                587202560/1073741824    54%&lt;br/&gt;
                639631360/1073741824    59%&lt;br/&gt;
                681574400/1073741824    63%&lt;br/&gt;
                713031680/1073741824    66%&lt;br/&gt;
                723517440/1073741824    67%&lt;br/&gt;
                765460480/1073741824    71%&lt;br/&gt;
                817889280/1073741824    76%&lt;br/&gt;
                849346560/1073741824    79%&lt;br/&gt;
                870318080/1073741824    81%&lt;br/&gt;
                922746880/1073741824    85%             996147200/1073741824    92%&lt;br/&gt;
                1038090240/1073741824   96%&lt;br/&gt;
Fri Jan  6 14:05:12 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; preallocating a journal file /u01/shard3/master/journal/prealloc.1&lt;br/&gt;
                136314880/1073741824    12%&lt;br/&gt;
                178257920/1073741824    16%&lt;br/&gt;
                209715200/1073741824    19%&lt;br/&gt;
                241172480/1073741824    22%&lt;br/&gt;
                283115520/1073741824    26%&lt;br/&gt;
                314572800/1073741824    29%&lt;br/&gt;
                377487360/1073741824    35%&lt;br/&gt;
                419430400/1073741824    39%&lt;br/&gt;
                450887680/1073741824    41%&lt;br/&gt;
                492830720/1073741824    45%&lt;br/&gt;
                513802240/1073741824    47%&lt;br/&gt;
                545259520/1073741824    50%&lt;br/&gt;
                587202560/1073741824    54%&lt;br/&gt;
                629145600/1073741824    58%&lt;br/&gt;
                660602880/1073741824    61%&lt;br/&gt;
                702545920/1073741824    65%&lt;br/&gt;
                734003200/1073741824    68%&lt;br/&gt;
                765460480/1073741824    71%&lt;br/&gt;
                796917760/1073741824    74%&lt;br/&gt;
                828375040/1073741824    77%&lt;br/&gt;
                870318080/1073741824    81%&lt;br/&gt;
                901775360/1073741824    83%&lt;br/&gt;
                933232640/1073741824    86%&lt;br/&gt;
                975175680/1073741824    90%&lt;br/&gt;
                1017118720/1073741824   94%&lt;br/&gt;
                1059061760/1073741824   98%&lt;br/&gt;
Fri Jan  6 14:06:49 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; preallocating a journal file /u01/shard3/master/journal/prealloc.2&lt;br/&gt;
                115343360/1073741824    10%&lt;br/&gt;
                136314880/1073741824    12%&lt;br/&gt;
                167772160/1073741824    15%&lt;br/&gt;
                209715200/1073741824    19%&lt;br/&gt;
                241172480/1073741824    22%&lt;br/&gt;
                283115520/1073741824    26%&lt;br/&gt;
                314572800/1073741824    29%&lt;br/&gt;
                346030080/1073741824    32%&lt;br/&gt;
                367001600/1073741824    34%&lt;br/&gt;
                408944640/1073741824    38%&lt;br/&gt;
                450887680/1073741824    41%&lt;br/&gt;
                482344960/1073741824    44%&lt;br/&gt;
                503316480/1073741824    46%&lt;br/&gt;
                545259520/1073741824    50%&lt;br/&gt;
                587202560/1073741824    54%&lt;br/&gt;
                597688320/1073741824    55%&lt;br/&gt;
                650117120/1073741824    60%&lt;br/&gt;
                681574400/1073741824    63%&lt;br/&gt;
                713031680/1073741824    66%&lt;br/&gt;
                744488960/1073741824    69%&lt;br/&gt;
                786432000/1073741824    73%&lt;br/&gt;
                817889280/1073741824    76%&lt;br/&gt;
                849346560/1073741824    79%&lt;br/&gt;
                859832320/1073741824    80%&lt;br/&gt;
                901775360/1073741824    83%&lt;br/&gt;
                943718400/1073741824    87%&lt;br/&gt;
                975175680/1073741824    90%&lt;br/&gt;
                1006632960/1073741824   93%&lt;br/&gt;
                1038090240/1073741824   96%&lt;br/&gt;
Fri Jan  6 14:08:37 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; waiting for connections on port 20000&lt;br/&gt;
Fri Jan  6 14:08:37 &lt;span class=&quot;error&quot;&gt;&amp;#91;websvr&amp;#93;&lt;/span&gt; admin web console waiting for connections on port 21000&lt;/p&gt;
</comment>
                            <comment id="78177" author="eliot" created="Fri, 6 Jan 2012 17:55:01 +0000"  >&lt;p&gt;How did you unmount?&lt;br/&gt;
Was it a single drive or a raid?&lt;br/&gt;
Can you send the log?&lt;/p&gt;

&lt;p&gt;You shouldn&apos;t have been allowed to unmount with mongod running...&lt;/p&gt;</comment>
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