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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-58281] hang analyzer unable to load BSON library</title>
                <link>https://jira.mongodb.org/browse/SERVER-58281</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;I first noticed this in a patch build debugging a timed out BF-related issue.&lt;/p&gt;

&lt;p&gt;It seems that the hang analyzer script is unable to locate a usable Python BSON library when it installs the &lt;a href=&quot;https://github.com/mongodb/mongo/blob/72df6f6c32cdc8820a2ffe1a204fdd3e135b4ffe/buildscripts/gdb/mongo_printers.py#L16&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;GDB pretty printers&lt;/a&gt;. Using a recent non-patch related task as an example, this prevents the hang analyzer from &lt;a href=&quot;https://github.com/mongodb/mongo/blob/72df6f6c32cdc8820a2ffe1a204fdd3e135b4ffe/buildscripts/gdb/mongo_printers.py#L168&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;decoding  BSONObj function arguments&lt;/a&gt; in the stack traces:&lt;/p&gt;

&lt;p/&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;x debugger_mongod.logWarning: Could not load bson library for Python &apos;3.9.2 (default, May 21 2021, 20:36:03)&lt;/span&gt;&lt;/pre&gt;
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						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;Warning: Could not load bson library for Python &apos;3.9.2 (default, May 21 2021, 20:36:03)&lt;/span&gt;&lt;/pre&gt;
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						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;#22 0x00007f53c067f7e6 in mongo::repl::(anonymous namespace)::CmdHello::runWithReplyBuilder (this=0x7f53c068f2a0 &amp;lt;mongo::repl::(anonymous namespace)::cmdIsMaster&amp;gt;, opCtx=0x55e0f5da3540, cmdObj=owned BSONObj 120 bytes @ 0x55e0f656691d - unprintable or invalid, replyBuilder=0x55e0f6170960) at src/third_party/boost/boost/optional/optional.hpp:396&lt;/span&gt;&lt;/pre&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;#22 0x00007fcb91e867e6 in mongo::repl::(anonymous namespace)::CmdHello::runWithReplyBuilder (this=0x7fcb91e962a0 &amp;lt;mongo::repl::(anonymous namespace)::cmdIsMaster&amp;gt;, opCtx=0x56003dcefc00, cmdObj=owned BSONObj 120 bytes @ 0x56003cf98d5d - unprintable or invalid, replyBuilder=0x56003df217c0) at src/third_party/boost/boost/optional/optional.hpp:396&lt;/span&gt;&lt;/pre&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&amp;nbsp;&lt;/pre&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;x debugger_mongod_2241.log#22 0x00007fcb91e867e6 in mongo::repl::(anonymous namespace)::CmdHello::runWithReplyBuilder (this=0x7fcb91e962a0 &amp;lt;mongo::repl::(anonymous namespace)::cmdIsMaster&amp;gt;, opCtx=0x56003dcefc00, cmdObj=owned BSONObj 120 bytes @ 0x56003cf98d5d - unprintable or invalid, replyBuilder=0x56003df217c0) at src/third_party/boost/boost/optional/optional.hpp:396&lt;/span&gt;&lt;/pre&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&amp;nbsp;&lt;/pre&gt;
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						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;x debugger_mongod_2241_raw_stacks.log#22 0x00007fcb91e867e6 in mongo::repl::(anonymous namespace)::CmdHello::runWithReplyBuilder (this=0x7fcb91e962a0 &amp;lt;mongo::repl::(anonymous namespace)::cmdIsMaster&amp;gt;, opCtx=0x56003dcefc00, cmdObj=owned BSONObj 120 bytes @ 0x56003cf98d5d - unprintable or invalid, replyBuilder=0x56003df217c0) at src/third_party/boost/boost/optional/optional.hpp:396&lt;/span&gt;&lt;/pre&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&amp;nbsp;&lt;/pre&gt;
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						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;x debugger_mongod_471.log&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
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						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;x debugger_mongod_471_raw_stacks.log#22 0x00007f7f3a0f67e6 in mongo::repl::(anonymous namespace)::CmdHello::runWithReplyBuilder (this=0x7f7f3a1062a0 &amp;lt;mongo::repl::(anonymous namespace)::cmdIsMaster&amp;gt;, opCtx=0x559456e76c00, cmdObj=owned BSONObj 120 bytes @ 0x55945bf5321d - unprintable or invalid, replyBuilder=0x559456bd87c0) at src/third_party/boost/boost/optional/optional.hpp:396&lt;/span&gt;&lt;/pre&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&amp;nbsp;&lt;/pre&gt;
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						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;x debugger_mongod_477.log#22 0x00007f53c067f7e6 in mongo::repl::(anonymous namespace)::CmdHello::runWithReplyBuilder (this=0x7f53c068f2a0 &amp;lt;mongo::repl::(anonymous namespace)::cmdIsMaster&amp;gt;, opCtx=0x55e0f5da3540, cmdObj=owned BSONObj 120 bytes @ 0x55e0f656691d - unprintable or invalid, replyBuilder=0x55e0f6170960) at src/third_party/boost/boost/optional/optional.hpp:396&lt;/span&gt;&lt;/pre&gt;
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					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;x debugger_mongod_477_raw_stacks.log#22 0x00007f53c067f7e6 in mongo::repl::(anonymous namespace)::CmdHello::runWithReplyBuilder (this=0x7f53c068f2a0 &amp;lt;mongo::repl::(anonymous namespace)::cmdIsMaster&amp;gt;, opCtx=0x55e0f5da3540, cmdObj=owned BSONObj 120 bytes @ 0x55e0f656691d - unprintable or invalid, replyBuilder=0x55e0f6170960) at src/third_party/boost/boost/optional/optional.hpp:396&lt;/span&gt;&lt;/pre&gt;
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&lt;/table&gt;
&lt;/div&gt;
&lt;p/&gt;
</description>
                <environment></environment>
        <key id="1808758">SERVER-58281</key>
            <summary>hang analyzer unable to load BSON library</summary>
                <type id="1" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14703&amp;avatarType=issuetype">Bug</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="13201">Fixed</resolution>
                                        <assignee username="tausif.rahman@mongodb.com">Tausif Rahman</assignee>
                                    <reporter username="benety.goh@mongodb.com">Benety Goh</reporter>
                        <labels>
                            <label>neweng</label>
                            <label>tig-hanganalyzer</label>
                    </labels>
                <created>Mon, 5 Jul 2021 14:37:13 +0000</created>
                <updated>Sun, 29 Oct 2023 21:51:19 +0000</updated>
                            <resolved>Tue, 4 Jan 2022 15:26:14 +0000</resolved>
                                                    <fixVersion>5.3.0</fixVersion>
                                    <component>Testing Infrastructure</component>
                                        <votes>0</votes>
                                    <watches>4</watches>
                                                                                                                <comments>
                            <comment id="4273879" author="xgen-internal-githook" created="Tue, 4 Jan 2022 15:24:08 +0000"  >&lt;p&gt;Author:&lt;/p&gt;
{&apos;name&apos;: &apos;trahman1318&apos;, &apos;email&apos;: &apos;tausif.rahman@mongodb.com&apos;, &apos;username&apos;: &apos;trahman1318&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-58281&quot; title=&quot;hang analyzer unable to load BSON library&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-58281&quot;&gt;&lt;del&gt;SERVER-58281&lt;/del&gt;&lt;/a&gt; hang analyzer unable to load BSON library&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/2295d0afb02a5954e9ea359962e9537c89265c74&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/2295d0afb02a5954e9ea359962e9537c89265c74&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="3918121" author="robert.guo" created="Tue, 6 Jul 2021 15:07:54 +0000"  >&lt;p&gt;As Richard shrewdly pointed out, we don&apos;t seem to be using venv based on the output of &lt;tt&gt;sys.path&lt;/tt&gt; in Benety&apos;s above comment.&lt;/p&gt;</comment>
                            <comment id="3918110" author="robert.guo" created="Tue, 6 Jul 2021 15:03:52 +0000"  >&lt;p&gt;Thanks for the detailed info Benety. We can take a first look.&lt;/p&gt;

&lt;p&gt;For STM:&lt;br/&gt;
since this works on a spawn host, we should look into if there&apos;re anything weird about the physical hosts or environment that failed to load the BSON library, either because a previous task clobbered the package that GDB uses somehow or the incorrect Python or GDB is used.&lt;/p&gt;</comment>
                    </comments>
                <issuelinks>
                            <issuelinktype id="10012">
                    <name>Related</name>
                                            <outwardlinks description="related to">
                                        <issuelink>
            <issuekey id="1677399">SERVER-56019</issuekey>
        </issuelink>
                            </outwardlinks>
                                                                <inwardlinks description="is related to">
                                        <issuelink>
            <issuekey id="323733">SERVER-26634</issuekey>
        </issuelink>
            <issuelink>
            <issuekey id="1809318">SERVER-58277</issuekey>
        </issuelink>
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