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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
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<item>
            <title>[SERVER-8241] assertion failures (saveerrmsg) during repair</title>
                <link>https://jira.mongodb.org/browse/SERVER-8241</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description>&lt;p&gt;Was running a repair with the following command and got this assertion error in the log of 2 out of 3 shards. The third shard had a different assertion error, which I&apos;m creating a different bug for:&lt;/p&gt;

&lt;p&gt;ubuntu@mongo1:~$ mongod --version&lt;br/&gt;
db version v2.2.0, pdfile version 4.5&lt;br/&gt;
Fri Jan 18 20:56:42 git version: f5e83eae9cfbec7fb7a071321928f00d1b0c5207&lt;/p&gt;

&lt;p&gt;sudo -u mongodb mongod --dbpath=/db/mongodb --repair --repairpath=/export/mongodb --nojournal&lt;/p&gt;

&lt;p&gt;Fri Jan 18 18:52:26 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1926460400/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:52:36 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1927349300/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:52:46 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1928551200/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:52:56 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1929329200/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:53:06 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1930147300/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:53:16 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1931131500/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:53:27 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1931958000/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:53:37 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1933142600/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:53:47 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1934033200/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:53:57 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1935221200/3967177714   48%&lt;br/&gt;
Fri Jan 18 18:53:59 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;  pb3 Assertion failure le &amp;amp;&amp;amp; !saveerrmsg.empty() src/mongo/db/pdfile.cpp 1381&lt;br/&gt;
0xade6e1 0x803dfd 0x74849e 0x7490bd 0xae2c0d 0x737f9c 0x8535bc 0x8560c9 0x856269 0x74037a 0x5596d8 0x55b78d 0x55c6f0 0x55d2dd 0x563dbe 0x565399 0x7f0873f5830d 0x557869&lt;br/&gt;
 mongod(_ZN5mongo15printStackTraceERSo+0x21) &lt;span class=&quot;error&quot;&gt;&amp;#91;0xade6e1&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo12verifyFailedEPKcS1_j+0xfd) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x803dfd&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo16insert_makeIndexEPNS_16NamespaceDetailsERKSsRKNS_7DiskLocE+0x7be) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x74849e&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo11DataFileMgr6insertEPKcPKvibbPb+0x93d) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7490bd&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo17ensureHaveIdIndexEPKc+0x7ad) &lt;span class=&quot;error&quot;&gt;&amp;#91;0xae2c0d&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo21ensureIdIndexForNewNsEPKc+0x9c) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x737f9c&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo6Cloner2goEPKcRKNS_12CloneOptionsERSt3setISsSt4lessISsESaISsEERSsPi+0xd1c) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8535bc&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo6Cloner2goEPKcRSsRKSsbbbbbbPi+0x139) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x8560c9&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo9cloneFromEPKcRSsRKSsbbbbbbPi+0x59) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x856269&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo14repairDatabaseESsRSsbb+0x52a) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x74037a&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo11doDBUpgradeERKSsSsPNS_14DataFileHeaderE+0x68) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x5596d8&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod() &lt;span class=&quot;error&quot;&gt;&amp;#91;0x55b78d&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo14_initAndListenEi+0x480) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x55c6f0&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(_ZN5mongo13initAndListenEi+0x1d) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x55d2dd&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod() &lt;span class=&quot;error&quot;&gt;&amp;#91;0x563dbe&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(main+0x9) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x565399&amp;#93;&lt;/span&gt;&lt;br/&gt;
 /lib/x86_64-linux-gnu/libc.so.6(__libc_start_main+0xed) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x7f0873f5830d&amp;#93;&lt;/span&gt;&lt;br/&gt;
 mongod(__gxx_personality_v0+0x469) &lt;span class=&quot;error&quot;&gt;&amp;#91;0x557869&amp;#93;&lt;/span&gt;&lt;br/&gt;
Fri Jan 18 18:54:00 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; exception in initAndListen: 0 assertion src/mongo/db/pdfile.cpp:1381, terminating&lt;br/&gt;
Fri Jan 18 18:54:00 dbexit:&lt;br/&gt;
Fri Jan 18 18:54:00 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: going to close listening sockets...&lt;br/&gt;
Fri Jan 18 18:54:00 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: going to flush diaglog...&lt;br/&gt;
Fri Jan 18 18:54:00 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: going to close sockets...&lt;br/&gt;
Fri Jan 18 18:54:00 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: waiting for fs preallocator...&lt;br/&gt;
Fri Jan 18 18:54:00 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: closing all files...&lt;br/&gt;
Fri Jan 18 18:54:02 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             279/2819        9%&lt;br/&gt;
Fri Jan 18 18:54:04 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             578/2819        20%&lt;br/&gt;
Fri Jan 18 18:54:06 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             876/2819        31%&lt;br/&gt;
Fri Jan 18 18:54:08 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1173/2819       41%&lt;br/&gt;
Fri Jan 18 18:54:10 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1420/2819       50%&lt;br/&gt;
Fri Jan 18 18:54:12 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1426/2819       50%&lt;br/&gt;
Fri Jan 18 18:54:14 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1434/2819       50%&lt;br/&gt;
Fri Jan 18 18:54:16 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1440/2819       51%&lt;br/&gt;
Fri Jan 18 18:54:18 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1455/2819       51%&lt;br/&gt;
Fri Jan 18 18:54:20 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1479/2819       52%&lt;br/&gt;
Fri Jan 18 18:54:22 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1485/2819       52%&lt;br/&gt;
Fri Jan 18 18:54:24 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1492/2819       52%&lt;br/&gt;
Fri Jan 18 18:54:26 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             1765/2819       62%&lt;br/&gt;
Fri Jan 18 18:54:28 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             2060/2819       73%&lt;br/&gt;
Fri Jan 18 18:54:30 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             2356/2819       83%&lt;br/&gt;
Fri Jan 18 18:54:32 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             2615/2819       92%&lt;br/&gt;
Fri Jan 18 18:54:34 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt;             2753/2819       97%&lt;br/&gt;
Fri Jan 18 18:54:34 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; closeAllFiles() finished&lt;br/&gt;
Fri Jan 18 18:54:34 &lt;span class=&quot;error&quot;&gt;&amp;#91;initandlisten&amp;#93;&lt;/span&gt; shutdown: removing fs lock...&lt;br/&gt;
Fri Jan 18 18:54:34 dbexit: really exiting now&lt;/p&gt;</description>
                <environment>ubuntu on EC2</environment>
        <key id="62605">SERVER-8241</key>
            <summary>assertion failures (saveerrmsg) during repair</summary>
                <type id="1" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14703&amp;avatarType=issuetype">Bug</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="4">Incomplete</resolution>
                                        <assignee username="aaron">Aaron Staple</assignee>
                                    <reporter username="zacwitte">Zac Witte</reporter>
                        <labels>
                    </labels>
                <created>Fri, 18 Jan 2013 20:58:50 +0000</created>
                <updated>Wed, 10 Dec 2014 23:19:12 +0000</updated>
                            <resolved>Mon, 3 Jun 2013 00:01:20 +0000</resolved>
                                    <version>2.2.0</version>
                                                    <component>Admin</component>
                    <component>Logging</component>
                                        <votes>0</votes>
                                    <watches>6</watches>
                                                                                                                <comments>
                            <comment id="351231" author="dan@10gen.com" created="Mon, 3 Jun 2013 00:01:20 +0000"  >&lt;p&gt;This is likely due to running out of disk space in the dbpath while building the index, but cannot say for sure without size statistics and record of available disk space.  &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-8432&quot; title=&quot;Mongod can fail to output error message during index building&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-8432&quot;&gt;&lt;del&gt;SERVER-8432&lt;/del&gt;&lt;/a&gt; will fix the error messaging issue.&lt;/p&gt;</comment>
                            <comment id="248176" author="zacwitte" created="Thu, 24 Jan 2013 01:01:29 +0000"  >&lt;p&gt;Unfortunately I don&apos;t have the original DB anymore. I had to delete the files to complete the repair. I ended up deleting a large collection, doing the repair again, and regenerating the collection from my source files.&lt;/p&gt;</comment>
                            <comment id="248131" author="aaron" created="Wed, 23 Jan 2013 23:57:32 +0000"  >&lt;p&gt;Hi Zac,&lt;/p&gt;

&lt;p&gt;Do you still have the original data files available?  Is it possible send us a coll.stats() for the collection on which this error occurred?&lt;/p&gt;</comment>
                    </comments>
                <issuelinks>
                            <issuelinktype id="10010">
                    <name>Duplicate</name>
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                                        <issuelink>
            <issuekey id="63976">SERVER-8432</issuekey>
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                                        <issuelink>
            <issuekey id="82385">SERVER-10219</issuekey>
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            <issuekey id="62606">SERVER-8242</issuekey>
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