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    <title>MongoDB Jira</title>
    <link>https://jira.mongodb.org</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>9.7.1</version>
        <build-number>970001</build-number>
        <build-date>13-04-2023</build-date>
    </build-info>


<item>
            <title>[SERVER-83548] Exclude the oplog when executing the autoCompact command</title>
                <link>https://jira.mongodb.org/browse/SERVER-83548</link>
                <project id="10000" key="SERVER">Core Server</project>
                    <description></description>
                <environment></environment>
        <key id="2507812">SERVER-83548</key>
            <summary>Exclude the oplog when executing the autoCompact command</summary>
                <type id="3" iconUrl="https://jira.mongodb.org/secure/viewavatar?size=xsmall&amp;avatarId=14718&amp;avatarType=issuetype">Task</type>
                                            <priority id="3" iconUrl="https://jira.mongodb.org/images/icons/priorities/major.svg">Major - P3</priority>
                        <status id="6" iconUrl="https://jira.mongodb.org/images/icons/statuses/closed.png" description="The issue is considered finished, the resolution is correct. Issues which are closed can be reopened.">Closed</status>
                    <statusCategory id="3" key="done" colorName="success"/>
                                    <resolution id="13201">Fixed</resolution>
                                        <assignee username="etienne.petrel@mongodb.com">Etienne Petrel</assignee>
                                    <reporter username="etienne.petrel@mongodb.com">Etienne Petrel</reporter>
                        <labels>
                    </labels>
                <created>Wed, 22 Nov 2023 22:31:22 +0000</created>
                <updated>Sun, 7 Jan 2024 08:09:48 +0000</updated>
                            <resolved>Wed, 6 Dec 2023 04:05:11 +0000</resolved>
                                                    <fixVersion>7.3.0-rc0</fixVersion>
                                                        <votes>0</votes>
                                    <watches>4</watches>
                                                                                                                <comments>
                            <comment id="5928520" author="xgen-internal-githook" created="Wed, 6 Dec 2023 03:52:05 +0000"  >&lt;p&gt;Author: &lt;/p&gt;
{&apos;name&apos;: &apos;Etienne Petrel&apos;, &apos;email&apos;: &apos;etienne.petrel@mongodb.com&apos;, &apos;username&apos;: &apos;etienneptl&apos;}
&lt;p&gt;Message: &lt;a href=&quot;https://jira.mongodb.org/browse/SERVER-83548&quot; title=&quot;Exclude the oplog when executing the autoCompact command&quot; class=&quot;issue-link&quot; data-issue-key=&quot;SERVER-83548&quot;&gt;&lt;del&gt;SERVER-83548&lt;/del&gt;&lt;/a&gt; Always exclude the oplog when enabling background compaction&lt;/p&gt;

&lt;p&gt;GitOrigin-RevId: 74fcb07147d951e049f194904d96c237634d859e&lt;br/&gt;
Branch: master&lt;br/&gt;
&lt;a href=&quot;https://github.com/mongodb/mongo/commit/89dde5b46155fa8e65dbc3c48e1ada0755159291&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;https://github.com/mongodb/mongo/commit/89dde5b46155fa8e65dbc3c48e1ada0755159291&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="5927943" author="JIRAUSER1258229" created="Tue, 5 Dec 2023 22:03:19 +0000"  >&lt;p&gt;&lt;a href=&quot;https://spruce.mongodb.com/version/656e53c05623436755d31fb4/tasks?sorts=STATUS%3AASC%3BBASE_STATUS%3ADESC&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;Patch build&lt;/a&gt;.&lt;/p&gt;</comment>
                            <comment id="5913967" author="gregory.noma" created="Wed, 29 Nov 2023 21:45:35 +0000"  >&lt;p&gt;&lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=etienne.petrel%40mongodb.com&quot; class=&quot;user-hover&quot; rel=&quot;etienne.petrel@mongodb.com&quot;&gt;etienne.petrel@mongodb.com&lt;/a&gt; I would suggest doing it &lt;a href=&quot;https://github.com/mongodb/mongo/blob/0760f954e190275a77a12b0f6ed8317824301bc5/src/mongo/db/commands/auto_compact.cpp#L108&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;here&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="5913899" author="JIRAUSER1258229" created="Wed, 29 Nov 2023 21:20:15 +0000"  >&lt;p&gt;&lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=gregory.noma%40mongodb.com&quot; class=&quot;user-hover&quot; rel=&quot;gregory.noma@mongodb.com&quot;&gt;gregory.noma@mongodb.com&lt;/a&gt;, oh I see, thanks for clarifying. From which layer is it ok to retrieve the oplog URI?&lt;/p&gt;</comment>
                            <comment id="5912316" author="gregory.wlodarek" created="Wed, 29 Nov 2023 14:16:58 +0000"  >&lt;blockquote&gt;&lt;p&gt;When does the collection not exist? When do we not create the oplog?&lt;/p&gt;&lt;/blockquote&gt;
&lt;p&gt;The oplog collection is created once a replica set has been initialized. It will not exist if the node has only been in standalone mode since the beginning.&lt;/p&gt;</comment>
                            <comment id="5912290" author="gregory.noma" created="Wed, 29 Nov 2023 14:06:19 +0000"  >&lt;blockquote&gt;
&lt;p&gt;However, we do not want to expose it for now in the MDB command, we want it to be used internally.&lt;/p&gt;&lt;/blockquote&gt;

&lt;p&gt;Oh sorry if I wasn&apos;t clear &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=etienne.petrel%40mongodb.com&quot; class=&quot;user-hover&quot; rel=&quot;etienne.petrel@mongodb.com&quot;&gt;etienne.petrel@mongodb.com&lt;/a&gt;, I didn&apos;t mean exposing it in the MDB command. What I meant was just exposing it as a parameter to the &lt;tt&gt;WiredTigerKVEngine::autoCompact&lt;/tt&gt; function, since it may be a layering violation for that function to internally fetch the URI of the oplog table.&lt;/p&gt;</comment>
                            <comment id="5911499" author="JIRAUSER1258229" created="Wed, 29 Nov 2023 06:29:50 +0000"  >&lt;p&gt;Thank you both!&lt;/p&gt;

&lt;blockquote&gt;
&lt;p&gt;Taking a step back to think about the WiredTigerKVEngine::autoCompact API, would it make sense to have it just take as a parameter a set of idents that should be excluded?&lt;/p&gt;&lt;/blockquote&gt;

&lt;p&gt;We do have this feature ready at a WiredTiger level, see &lt;a href=&quot;https://jira.mongodb.org/browse/WT-11752&quot; title=&quot;Update the compact session API with a &amp;quot;exclude&amp;quot; option&quot; class=&quot;issue-link&quot; data-issue-key=&quot;WT-11752&quot;&gt;&lt;del&gt;WT-11752&lt;/del&gt;&lt;/a&gt;. However, we do not want to expose it for now in the MDB command, we want it to be used internally.&lt;/p&gt;

&lt;p&gt;Thank you, &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=gregory.wlodarek%40mongodb.com&quot; class=&quot;user-hover&quot; rel=&quot;gregory.wlodarek@mongodb.com&quot;&gt;gregory.wlodarek@mongodb.com&lt;/a&gt; for the suggested piece of code. When does the collection not exist? When do we not create the oplog?&lt;/p&gt;</comment>
                            <comment id="5909064" author="gregory.wlodarek" created="Tue, 28 Nov 2023 14:51:57 +0000"  >&lt;p&gt;I like the idea of adding a new exclude list parameter to &lt;tt&gt;WiredTigerKVEngine::autoCompact&lt;/tt&gt;.&lt;/p&gt;

&lt;p&gt;In the auto_compact.cpp code we can fetch the ident like so:&lt;/p&gt;
&lt;p/&gt;
&lt;div id=&quot;syntaxplugin&quot; class=&quot;syntaxplugin&quot; style=&quot;border: 1px dashed #bbb; border-radius: 5px !important; overflow: auto; max-height: 30em;&quot;&gt;
&lt;table cellspacing=&quot;0&quot; cellpadding=&quot;0&quot; border=&quot;0&quot; width=&quot;100%&quot; style=&quot;font-size: 1em; line-height: 1.4em !important; font-weight: normal; font-style: normal; color: black;&quot;&gt;
		&lt;tbody &gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;    &lt;/span&gt;&lt;span style=&quot;color: #008200; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;// Global MODE_IX lock must be held prior to this point&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;    std::shared_ptr&amp;lt;&lt;/span&gt;&lt;span style=&quot;color: #006699; font-weight: bold; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;const&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; CollectionCatalog&amp;gt; catalog = CollectionCatalog::get(opCtx);&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;    auto collection = catalog.lookupCollectionByNamespace(opCtx, NamespaceString::kRsOplogNamespace);&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;    &lt;/span&gt;&lt;span style=&quot;color: #006699; font-weight: bold; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;if&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; (!collection) {&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;        &lt;/span&gt;&lt;span style=&quot;color: #008200; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;// Collection doesn&apos;t exist&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;    }&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;    &lt;/span&gt;&lt;span style=&quot;color: #006699; font-weight: bold; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;const&lt;/span&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt; std::string uri = collection-&amp;gt;getSharedIdent()-&amp;gt;getIdent();&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
			&lt;/tbody&gt;
&lt;/table&gt;
&lt;/div&gt;
&lt;p/&gt;</comment>
                            <comment id="5909035" author="gregory.noma" created="Tue, 28 Nov 2023 14:45:47 +0000"  >&lt;p&gt;&lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=etienne.petrel%40mongodb.com&quot; class=&quot;user-hover&quot; rel=&quot;etienne.petrel@mongodb.com&quot;&gt;etienne.petrel@mongodb.com&lt;/a&gt; if you&apos;re trying to get the oplog table&apos;s URI from within &lt;tt&gt;WiredTigerKVEngine::autoCompact&lt;/tt&gt;, I see that we have &lt;tt&gt;WiredTigerKVEngine::_oplogRecordStore&lt;/tt&gt; so in theory I think you may be able to do something like this:&lt;/p&gt;
&lt;p/&gt;
&lt;div id=&quot;syntaxplugin&quot; class=&quot;syntaxplugin&quot; style=&quot;border: 1px dashed #bbb; border-radius: 5px !important; overflow: auto; max-height: 30em;&quot;&gt;
&lt;table cellspacing=&quot;0&quot; cellpadding=&quot;0&quot; border=&quot;0&quot; width=&quot;100%&quot; style=&quot;font-size: 1em; line-height: 1.4em !important; font-weight: normal; font-style: normal; color: black;&quot;&gt;
		&lt;tbody &gt;
				&lt;tr id=&quot;syntaxplugin_code_and_gutter&quot;&gt;
						&lt;td  style=&quot; line-height: 1.4em !important; padding: 0em; vertical-align: top;&quot;&gt;
					&lt;pre style=&quot;font-size: 1em; margin: 0 10px;  margin-top: 10px;   margin-bottom: 10px;  width: auto; padding: 0;&quot;&gt;&lt;span style=&quot;color: black; font-family: &apos;Consolas&apos;, &apos;Bitstream Vera Sans Mono&apos;, &apos;Courier New&apos;, Courier, monospace !important;&quot;&gt;auto oplogUri = _uri(_oplogRecordStore-&amp;gt;getIdent());&lt;/span&gt;&lt;/pre&gt;
			&lt;/td&gt;
		&lt;/tr&gt;
			&lt;/tbody&gt;
&lt;/table&gt;
&lt;/div&gt;
&lt;p/&gt;

&lt;p&gt;But with that being said, &lt;tt&gt;_oplogRecordStore&lt;/tt&gt; is only set by &lt;tt&gt;WiredTigerKVEngine::startOplogManager&lt;/tt&gt;/&lt;tt&gt;WiredTigerKVEngine::haltOplogManager&lt;/tt&gt; and is currently only used for equality checks. So there isn&apos;t a precedent so far for using it for anything else, but also I don&apos;t know the history of its current semantics and (limited) usage. &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=gregory.wlodarek%40mongodb.com&quot; class=&quot;user-hover&quot; rel=&quot;gregory.wlodarek@mongodb.com&quot;&gt;gregory.wlodarek@mongodb.com&lt;/a&gt; do you know anything more about this?&lt;/p&gt;

&lt;p&gt;Taking a step back to think about the &lt;tt&gt;WiredTigerKVEngine::autoCompact&lt;/tt&gt; API, would it make sense to have it just take as a parameter a set of idents that should be excluded? And then the caller (presumably the &lt;tt&gt;autoCompact&lt;/tt&gt; command) can fetch the oplog table URI at a higher level and pass it in to the function.&lt;/p&gt;</comment>
                            <comment id="5908137" author="JIRAUSER1258229" created="Tue, 28 Nov 2023 06:29:24 +0000"  >&lt;p&gt;The function to be updated should be &lt;tt&gt;WiredTigerKVEngine::autoCompact&lt;/tt&gt; and specifically, the compact &lt;a href=&quot;https://github.com/10gen/mongo/pull/16357/files#diff-7ab306cedfe208f1d42505a2e217aa42f9ea97dcfce5d5a27ce012e2a8cb1ef3R2784-R2789&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;configuration string&lt;/a&gt; with the &lt;a href=&quot;https://github.com/wiredtiger/wiredtiger/blob/b277962a80bc0dd7ba02ea23e7af44a57a7c3136/dist/api_data.py#L1394&quot; class=&quot;external-link&quot; target=&quot;_blank&quot; rel=&quot;nofollow noopener&quot;&gt;exclude&lt;/a&gt; keyword.&lt;br/&gt;
&lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=gregory.wlodarek%40mongodb.com&quot; class=&quot;user-hover&quot; rel=&quot;gregory.wlodarek@mongodb.com&quot;&gt;gregory.wlodarek@mongodb.com&lt;/a&gt;, &lt;a href=&quot;https://jira.mongodb.org/secure/ViewProfile.jspa?name=gregory.noma%40mongodb.com&quot; class=&quot;user-hover&quot; rel=&quot;gregory.noma@mongodb.com&quot;&gt;gregory.noma@mongodb.com&lt;/a&gt;, how do we get the corresponding WiredTiger table name corresponding to the oplog collection?&lt;/p&gt;</comment>
                    </comments>
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                            <issuelinktype id="10011">
                    <name>Depends</name>
                                            <outwardlinks description="depends on">
                                        <issuelink>
            <issuekey id="2418445">SERVER-80121</issuekey>
        </issuelink>
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                                                        </issuelinktype>
                            <issuelinktype id="10012">
                    <name>Related</name>
                                            <outwardlinks description="related to">
                                        <issuelink>
            <issuekey id="2530232">SERVER-84357</issuekey>
        </issuelink>
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                                                        </issuelinktype>
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