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  1. Core Server
  2. SERVER-36837

WT Error, Fatal Assertion 28558

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Details

    • Bug
    • Status: Closed
    • Major - P3
    • Resolution: Done
    • 3.2.11
    • None
    • None
    • Linux

    Description

      Hi, my mongodb instance cannot start after restarting the server - without stopping the mongodb in advance. Here is log when I try to start it manually:

       

      # mongod --dbpath=/var/lib/mongodb 
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten] MongoDB starting : pid=2504 port=27017 dbpath=/var/lib/mongodb 64-bit host=vopicka.dev.dszn.cz
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten] db version v3.2.11
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten] git version: 009580ad490190ba33d1c6253ebd8d91808923e4
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten] OpenSSL version: OpenSSL 1.0.2l  25 May 2017
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten] allocator: tcmalloc
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten] modules: none
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten] build environment:
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten]     distarch: x86_64
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten]     target_arch: x86_64
      2018-08-24T15:06:37.183+0200 I CONTROL  [initandlisten] options: { storage: { dbPath: "/var/lib/mongodb" } }
      2018-08-24T15:06:37.214+0200 I -        [initandlisten] Detected data files in /var/lib/mongodb created by the 'wiredTiger' storage engine, so setting the active storage engine to 'wiredTiger'.
      2018-08-24T15:06:37.214+0200 I STORAGE  [initandlisten] wiredtiger_open config: create,cache_size=9G,session_max=20000,eviction=(threads_max=4),config_base=false,statistics=(fast),log=(enabled=true,archive=true,path=journal,compressor=snappy),file_manager=(close_idle_time=100000),checkpoint=(wait=60,log_size=2GB),statistics_log=(wait=0),
      2018-08-24T15:06:37.258+0200 E STORAGE  [initandlisten] WiredTiger (0) [1535115997:258251][2504:0x7fa9fcb9ccc0], file:WiredTiger.wt, WT_CURSOR.insert: read checksum error for 16384B block at offset 28672: block header checksum of 979725410 doesn't match expected checksum of 2731250473
      2018-08-24T15:06:37.258+0200 E STORAGE  [initandlisten] WiredTiger (0) [1535115997:258316][2504:0x7fa9fcb9ccc0], file:WiredTiger.wt, WT_CURSOR.insert: WiredTiger.wt: encountered an illegal file format or internal value
      2018-08-24T15:06:37.258+0200 E STORAGE  [initandlisten] WiredTiger (-31804) [1535115997:258343][2504:0x7fa9fcb9ccc0], file:WiredTiger.wt, WT_CURSOR.insert: the process must exit and restart: WT_PANIC: WiredTiger library panic
      2018-08-24T15:06:37.258+0200 I -        [initandlisten] Fatal Assertion 28558
      2018-08-24T15:06:37.258+0200 I -        [initandlisten] ***aborting after fassert() failure
      2018-08-24T15:06:37.274+0200 F -        [initandlisten] Got signal: 6 (Aborted). 0x559efba01e2a 0x559efba00c79 0x559efba0159f 0x7fa9f96490c0 0x7fa9f92cbfcf 0x7fa9f92cd3fa 0x559efb97de62 0x559efb71c272 0x559efae01e06 0x559efae01ef6 0x559efae02154 0x559efbf5eb65 0x559efbf7b57d 0x559efbf7f8e8 0x559efbf9ffc1 0x559efbf6e33e 0x559efbfbe7c6 0x559efc051476 0x559efbfe513c 0x559efc051ce8 0x559efbfb3e27 0x559efbfac047 0x559efb6ff569 0x559efb6f8914 0x559efb5e6f4e 0x559efae4f43b 0x559efae02fbf 0x7fa9f92b92b1 0x559efae4975a
      ----- BEGIN BACKTRACE -----
      {"backtrace":[{"b":"559EFA817000","o":"11EAE2A","s":"_ZN5mongo15printStackTraceERSo"},{"b":"559EFA817000","o":"11E9C79"},{"b":"559EFA817000","o":"11EA59F"},{"b":"7FA9F9638000","o":"110C0"},{"b":"7FA9F9299000","o":"32FCF","s":"gsignal"},{"b":"7FA9F9299000","o":"343FA","s":"abort"},{"b":"559EFA817000","o":"1166E62","s":"_ZN5mongo13fassertFailedEi"},{"b":"559EFA817000","o":"F05272"},{"b":"559EFA817000","o":"5EAE06","s":"__wt_eventv"},{"b":"559EFA817000","o":"5EAEF6","s":"__wt_err"},{"b":"559EFA817000","o":"5EB154","s":"__wt_panic"},{"b":"559EFA817000","o":"1747B65","s":"__wt_bm_read"},{"b":"559EFA817000","o":"176457D","s":"__wt_bt_read"},{"b":"559EFA817000","o":"17688E8","s":"__wt_page_in_func"},{"b":"559EFA817000","o":"1788FC1","s":"__wt_row_search"},{"b":"559EFA817000","o":"175733E","s":"__wt_btcur_insert"},{"b":"559EFA817000","o":"17A77C6"},{"b":"559EFA817000","o":"183A476"},{"b":"559EFA817000","o":"17CE13C","s":"__wt_log_scan"},{"b":"559EFA817000","o":"183ACE8","s":"__wt_txn_recover"},{"b":"559EFA817000","o":"179CE27","s":"__wt_connection_workers"},{"b":"559EFA817000","o":"1795047","s":"wiredtiger_open"},{"b":"559EFA817000","o":"EE8569","s":"_ZN5mongo18WiredTigerKVEngineC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_mbbb"},{"b":"559EFA817000","o":"EE1914"},{"b":"559EFA817000","o":"DCFF4E","s":"_ZN5mongo20ServiceContextMongoD29initializeGlobalStorageEngineEv"},{"b":"559EFA817000","o":"63843B","s":"_ZN5mongo13initAndListenEi"},{"b":"559EFA817000","o":"5EBFBF","s":"main"},{"b":"7FA9F9299000","o":"202B1","s":"__libc_start_main"},{"b":"559EFA817000","o":"63275A","s":"_start"}],"processInfo":{ "mongodbVersion" : "3.2.11", "gitVersion" : "009580ad490190ba33d1c6253ebd8d91808923e4", "compiledModules" : [], "uname" : { "sysname" : "Linux", "release" : "4.9.108-zen", "version" : "#1 SMP Fri Jun 15 09:22:41 CEST 2018", "machine" : "x86_64" }, "somap" : [ { "b" : "559EFA817000", "elfType" : 3, "buildId" : "E3D43627426AEF80AC6422132B85090B61C6488B" }, { "b" : "7FFD5C7B0000", "path" : "linux-vdso.so.1", "elfType" : 3, "buildId" : "B09B80DC0D1E32873BDE68F09018E27BD9A5E30E" }, { "b" : "7FA9FC712000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.62.0", "elfType" : 3, "buildId" : "24B12C5DB7EB27CA6913E110036B6D501DE43D58" }, { "b" : "7FA9FC4F9000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.62.0", "elfType" : 3, "buildId" : "3A8C0229F2AA03F8A062D06D70C30A7C7F49ED6A" }, { "b" : "7FA9FC2D1000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_thread.so.1.62.0", "elfType" : 3, "buildId" : "559760FAD4E5057673E6A198DCA0682077CA73AD" }, { "b" : "7FA9FC0CD000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_system.so.1.62.0", "elfType" : 3, "buildId" : "9CEA3F7F5BCDA68EFA83A109C7C1C5C95EE5F9EE" }, { "b" : "7FA9FBEC6000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_chrono.so.1.62.0", "elfType" : 3, "buildId" : "F7914F6A45BD6B1D843FF9B73651D7C85584D02F" }, { "b" : "7FA9FBBAD000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_regex.so.1.62.0", "elfType" : 3, "buildId" : "3FF0F4ABFF7BE32CCA250E9592555231B0960605" }, { "b" : "7FA9FB92F000", "path" : "/usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.5", "elfType" : 3, "buildId" : "B658AFC5A5081D3BC01514CD135E11A630ACADF9" }, { "b" : "7FA9FB727000", "path" : "/usr/lib/x86_64-linux-gnu/libsnappy.so.1", "elfType" : 3, "buildId" : "2E75BB07FA335FA51E4A1F9EEFB8040CFF8639E1" }, { "b" : "7FA9FB4B4000", "path" : "/lib/x86_64-linux-gnu/libpcre.so.3", "elfType" : 3, "buildId" : "1B72306EF00166FE1511D57140B50F5CE341170E" }, { "b" : "7FA9FB2AA000", "path" : "/usr/lib/x86_64-linux-gnu/libpcrecpp.so.0", "elfType" : 3, "buildId" : "F9E20B1533BE511A4666D245232091723BD56BA9" }, { "b" : "7FA9FB036000", "path" : "/usr/lib/libtcmalloc.so.4", "elfType" : 3, "buildId" : "63E43AB68BFBAD8631A9BC8549ADFA9BB8ED0DDC" }, { "b" : "7FA9FADE5000", "path" : "/usr/lib/x86_64-linux-gnu/libstemmer.so.0d", "elfType" : 3, "buildId" : "9CFDCA3EC241381801BA84204465310304FC7819" }, { "b" : "7FA9FABCB000", "path" : "/lib/x86_64-linux-gnu/libz.so.1", "elfType" : 3, "buildId" : "908B5A955D0A73FB8D31E0F927D0CDBA810CB300" }, { "b" : "7FA9FA962000", "path" : "/usr/lib/x86_64-linux-gnu/libssl.so.1.0.2", "elfType" : 3, "buildId" : "721B12B64868AFD74C3CC343086B69438BCF8A68" }, { "b" : "7FA9FA4FE000", "path" : "/usr/lib/x86_64-linux-gnu/libcrypto.so.1.0.2", "elfType" : 3, "buildId" : "E10962031A160EA04E49C7CD52C7A280FAEE19BD" }, { "b" : "7FA9FA2F6000", "path" : "/lib/x86_64-linux-gnu/librt.so.1", "elfType" : 3, "buildId" : "FE41526A83999F2FE9D0F8AADCD61D03A92CBB70" }, { "b" : "7FA9FA0F2000", "path" : "/lib/x86_64-linux-gnu/libdl.so.2", "elfType" : 3, "buildId" : "6A5D98612129B8186F21E800AFDFAAA627082F46" }, { "b" : "7FA9F9D70000", "path" : "/usr/lib/x86_64-linux-gnu/libstdc++.so.6", "elfType" : 3, "buildId" : "9E79D92950117355FD694E178C26ADE013CAE38B" }, { "b" : "7FA9F9A6C000", "path" : "/lib/x86_64-linux-gnu/libm.so.6", "elfType" : 3, "buildId" : "90DA054E12EA1A53EE0CBB5BB5E65F7069AEEE44" }, { "b" : "7FA9F9855000", "path" : "/lib/x86_64-linux-gnu/libgcc_s.so.1", "elfType" : 3, "buildId" : "036DAE71A7197C847FC5B720634642B922C74398" }, { "b" : "7FA9F9638000", "path" : "/lib/x86_64-linux-gnu/libpthread.so.0", "elfType" : 3, "buildId" : "968DF33F83963B559243653D74D27D89605BED02" }, { "b" : "7FA9F9299000", "path" : "/lib/x86_64-linux-gnu/libc.so.6", "elfType" : 3, "buildId" : "79450F6E36287865D093EA209B85A222209925FF" }, { "b" : "7FA9FC991000", "path" : "/lib64/ld-linux-x86-64.so.2", "elfType" : 3, "buildId" : "6F150F33B150D6A81E26A425DD47D713D00F2D29" }, { "b" : "7FA9F781C000", "path" : "/usr/lib/x86_64-linux-gnu/libicudata.so.57", "elfType" : 3, "buildId" : "2DCEE0955E6639060DE44DEF87E349D608549DEA" }, { "b" : "7FA9F73A2000", "path" : "/usr/lib/x86_64-linux-gnu/libicui18n.so.57", "elfType" : 3, "buildId" : "DC010724B2591402197199B373006C25AA7BD8D7" }, { "b" : "7FA9F6FFA000", "path" : "/usr/lib/x86_64-linux-gnu/libicuuc.so.57", "elfType" : 3, "buildId" : "4E0664B37A77B3EFED5E9C4E7A4E2E1BDB2B4FD9" }, { "b" : "7FA9F6DDF000", "path" : "/usr/lib/x86_64-linux-gnu/libunwind.so.8", "elfType" : 3, "buildId" : "D018350F8DD20CC8574A21B2030049AB13E7CB1D" }, { "b" : "7FA9F6BB9000", "path" : "/lib/x86_64-linux-gnu/liblzma.so.5", "elfType" : 3, "buildId" : "D94951F95E154271AE7CF843CC9D6D67EA502F5D" } ] }}
       mongod(_ZN5mongo15printStackTraceERSo+0x3A) [0x559efba01e2a]
       mongod(+0x11E9C79) [0x559efba00c79]
       mongod(+0x11EA59F) [0x559efba0159f]
       libpthread.so.0(+0x110C0) [0x7fa9f96490c0]
       libc.so.6(gsignal+0xCF) [0x7fa9f92cbfcf]
       libc.so.6(abort+0x16A) [0x7fa9f92cd3fa]
       mongod(_ZN5mongo13fassertFailedEi+0xA2) [0x559efb97de62]
       mongod(+0xF05272) [0x559efb71c272]
       mongod(__wt_eventv+0x42B) [0x559efae01e06]
       mongod(__wt_err+0xA0) [0x559efae01ef6]
       mongod(__wt_panic+0x24) [0x559efae02154]
       mongod(__wt_bm_read+0x135) [0x559efbf5eb65]
       mongod(__wt_bt_read+0x20D) [0x559efbf7b57d]
       mongod(__wt_page_in_func+0x1198) [0x559efbf7f8e8]
       mongod(__wt_row_search+0x701) [0x559efbf9ffc1]
       mongod(__wt_btcur_insert+0x4AE) [0x559efbf6e33e]
       mongod(+0x17A77C6) [0x559efbfbe7c6]
       mongod(+0x183A476) [0x559efc051476]
       mongod(__wt_log_scan+0xAEC) [0x559efbfe513c]
       mongod(__wt_txn_recover+0x398) [0x559efc051ce8]
       mongod(__wt_connection_workers+0x37) [0x559efbfb3e27]
       mongod(wiredtiger_open+0x1657) [0x559efbfac047]
       mongod(_ZN5mongo18WiredTigerKVEngineC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_mbbb+0xEA9) [0x559efb6ff569]
       mongod(+0xEE1914) [0x559efb6f8914]
       mongod(_ZN5mongo20ServiceContextMongoD29initializeGlobalStorageEngineEv+0x3CE) [0x559efb5e6f4e]
       mongod(_ZN5mongo13initAndListenEi+0x48B) [0x559efae4f43b]
       mongod(main+0x72F) [0x559efae02fbf]
       libc.so.6(__libc_start_main+0xF1) [0x7fa9f92b92b1]
       mongod(_start+0x2A) [0x559efae4975a]
      -----  END BACKTRACE  -----
      Aborted
      

       

      I also tried to run it with --repair, unfortunately without any luck:

       

      # mongod --repair --dbpath=/var/lib/mongodb --storageEngine wiredTiger
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] MongoDB starting : pid=2509 port=27017 dbpath=/var/lib/mongodb 64-bit host=vopicka.dev.dszn.cz
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] db version v3.2.11
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] git version: 009580ad490190ba33d1c6253ebd8d91808923e4
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] OpenSSL version: OpenSSL 1.0.2l 25 May 2017
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] allocator: tcmalloc
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] modules: none
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] build environment:
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] distarch: x86_64
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] target_arch: x86_64
      2018-08-24T15:06:49.948+0200 I CONTROL [initandlisten] options: { repair: true, storage: { dbPath: "/var/lib/mongodb", engine: "wiredTiger" } }
      2018-08-24T15:06:49.974+0200 I STORAGE [initandlisten] Detected WT journal files. Running recovery from last checkpoint.
      2018-08-24T15:06:49.974+0200 I STORAGE [initandlisten] journal to nojournal transition config: create,cache_size=9G,session_max=20000,eviction=(threads_max=4),config_base=false,statistics=(fast),log=(enabled=true,archive=true,path=journal,compressor=snappy),file_manager=(close_idle_time=100000),checkpoint=(wait=60,log_size=2GB),statistics_log=(wait=0),
      2018-08-24T15:06:50.012+0200 E STORAGE [initandlisten] WiredTiger (0) [1535116010:12938][2509:0x7f73d370fcc0], file:WiredTiger.wt, WT_CURSOR.insert: read checksum error for 16384B block at offset 28672: block header checksum of 979725410 doesn't match expected checksum of 2731250473
      2018-08-24T15:06:50.013+0200 E STORAGE [initandlisten] WiredTiger (0) [1535116010:13002][2509:0x7f73d370fcc0], file:WiredTiger.wt, WT_CURSOR.insert: WiredTiger.wt: encountered an illegal file format or internal value
      2018-08-24T15:06:50.013+0200 E STORAGE [initandlisten] WiredTiger (-31804) [1535116010:13017][2509:0x7f73d370fcc0], file:WiredTiger.wt, WT_CURSOR.insert: the process must exit and restart: WT_PANIC: WiredTiger library panic
      2018-08-24T15:06:50.013+0200 I - [initandlisten] Fatal Assertion 28558
      2018-08-24T15:06:50.013+0200 I - [initandlisten]
      ***aborting after fassert() failure
       
      2018-08-24T15:06:50.028+0200 F - [initandlisten] Got signal: 6 (Aborted).
      0x555de9ca0e2a 0x555de9c9fc79 0x555de9ca059f 0x7f73d01bc0c0 0x7f73cfe3efcf 0x7f73cfe403fa 0x555de9c1ce62 0x555de99bb272 0x555de90a0e06 0x555de90a0ef6 0x555de90a1154 0x555dea1fdb65 0x555dea21a57d 0x555dea21e8e8 0x555dea23efc1 0x555dea20d33e 0x555dea25d7c6 0x555dea2f0476 0x555dea28413c 0x555dea2f0ce8 0x555dea252e27 0x555dea24b047 0x555de999e300 0x555de9997914 0x555de9885f4e 0x555de90ee43b 0x555de90a1fbf 0x7f73cfe2c2b1 0x555de90e875a
      ----- BEGIN BACKTRACE -----
      {"backtrace":[{"b":"555DE8AB6000","o":"11EAE2A","s":"_ZN5mongo15printStackTraceERSo"},{"b":"555DE8AB6000","o":"11E9C79"},{"b":"555DE8AB6000","o":"11EA59F"},{"b":"7F73D01AB000","o":"110C0"},{"b":"7F73CFE0C000","o":"32FCF","s":"gsignal"},{"b":"7F73CFE0C000","o":"343FA","s":"abort"},{"b":"555DE8AB6000","o":"1166E62","s":"_ZN5mongo13fassertFailedEi"},{"b":"555DE8AB6000","o":"F05272"},{"b":"555DE8AB6000","o":"5EAE06","s":"__wt_eventv"},{"b":"555DE8AB6000","o":"5EAEF6","s":"__wt_err"},{"b":"555DE8AB6000","o":"5EB154","s":"__wt_panic"},{"b":"555DE8AB6000","o":"1747B65","s":"__wt_bm_read"},{"b":"555DE8AB6000","o":"176457D","s":"__wt_bt_read"},{"b":"555DE8AB6000","o":"17688E8","s":"__wt_page_in_func"},{"b":"555DE8AB6000","o":"1788FC1","s":"__wt_row_search"},{"b":"555DE8AB6000","o":"175733E","s":"__wt_btcur_insert"},{"b":"555DE8AB6000","o":"17A77C6"},{"b":"555DE8AB6000","o":"183A476"},{"b":"555DE8AB6000","o":"17CE13C","s":"__wt_log_scan"},{"b":"555DE8AB6000","o":"183ACE8","s":"__wt_txn_recover"},{"b":"555DE8AB6000","o":"179CE27","s":"__wt_connection_workers"},{"b":"555DE8AB6000","o":"1795047","s":"wiredtiger_open"},{"b":"555DE8AB6000","o":"EE8300","s":"_ZN5mongo18WiredTigerKVEngineC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_mbbb"},{"b":"555DE8AB6000","o":"EE1914"},{"b":"555DE8AB6000","o":"DCFF4E","s":"_ZN5mongo20ServiceContextMongoD29initializeGlobalStorageEngineEv"},{"b":"555DE8AB6000","o":"63843B","s":"_ZN5mongo13initAndListenEi"},{"b":"555DE8AB6000","o":"5EBFBF","s":"main"},{"b":"7F73CFE0C000","o":"202B1","s":"__libc_start_main"},{"b":"555DE8AB6000","o":"63275A","s":"_start"}],"processInfo":{ "mongodbVersion" : "3.2.11", "gitVersion" : "009580ad490190ba33d1c6253ebd8d91808923e4", "compiledModules" : [], "uname" : { "sysname" : "Linux", "release" : "4.9.108-zen", "version" : "#1 SMP Fri Jun 15 09:22:41 CEST 2018", "machine" : "x86_64" }, "somap" : [ { "b" : "555DE8AB6000", "elfType" : 3, "buildId" : "E3D43627426AEF80AC6422132B85090B61C6488B" }, { "b" : "7FFC45FEA000", "path" : "linux-vdso.so.1", "elfType" : 3, "buildId" : "B09B80DC0D1E32873BDE68F09018E27BD9A5E30E" }, { "b" : "7F73D3285000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.62.0", "elfType" : 3, "buildId" : "24B12C5DB7EB27CA6913E110036B6D501DE43D58" }, { "b" : "7F73D306C000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_filesystem.so.1.62.0", "elfType" : 3, "buildId" : "3A8C0229F2AA03F8A062D06D70C30A7C7F49ED6A" }, { "b" : "7F73D2E44000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_thread.so.1.62.0", "elfType" : 3, "buildId" : "559760FAD4E5057673E6A198DCA0682077CA73AD" }, { "b" : "7F73D2C40000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_system.so.1.62.0", "elfType" : 3, "buildId" : "9CEA3F7F5BCDA68EFA83A109C7C1C5C95EE5F9EE" }, { "b" : "7F73D2A39000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_chrono.so.1.62.0", "elfType" : 3, "buildId" : "F7914F6A45BD6B1D843FF9B73651D7C85584D02F" }, { "b" : "7F73D2720000", "path" : "/usr/lib/x86_64-linux-gnu/libboost_regex.so.1.62.0", "elfType" : 3, "buildId" : "3FF0F4ABFF7BE32CCA250E9592555231B0960605" }, { "b" : "7F73D24A2000", "path" : "/usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.5", "elfType" : 3, "buildId" : "B658AFC5A5081D3BC01514CD135E11A630ACADF9" }, { "b" : "7F73D229A000", "path" : "/usr/lib/x86_64-linux-gnu/libsnappy.so.1", "elfType" : 3, "buildId" : "2E75BB07FA335FA51E4A1F9EEFB8040CFF8639E1" }, { "b" : "7F73D2027000", "path" : "/lib/x86_64-linux-gnu/libpcre.so.3", "elfType" : 3, "buildId" : "1B72306EF00166FE1511D57140B50F5CE341170E" }, { "b" : "7F73D1E1D000", "path" : "/usr/lib/x86_64-linux-gnu/libpcrecpp.so.0", "elfType" : 3, "buildId" : "F9E20B1533BE511A4666D245232091723BD56BA9" }, { "b" : "7F73D1BA9000", "path" : "/usr/lib/libtcmalloc.so.4", "elfType" : 3, "buildId" : "63E43AB68BFBAD8631A9BC8549ADFA9BB8ED0DDC" }, { "b" : "7F73D1958000", "path" : "/usr/lib/x86_64-linux-gnu/libstemmer.so.0d", "elfType" : 3, "buildId" : "9CFDCA3EC241381801BA84204465310304FC7819" }, { "b" : "7F73D173E000", "path" : "/lib/x86_64-linux-gnu/libz.so.1", "elfType" : 3, "buildId" : "908B5A955D0A73FB8D31E0F927D0CDBA810CB300" }, { "b" : "7F73D14D5000", "path" : "/usr/lib/x86_64-linux-gnu/libssl.so.1.0.2", "elfType" : 3, "buildId" : "721B12B64868AFD74C3CC343086B69438BCF8A68" }, { "b" : "7F73D1071000", "path" : "/usr/lib/x86_64-linux-gnu/libcrypto.so.1.0.2", "elfType" : 3, "buildId" : "E10962031A160EA04E49C7CD52C7A280FAEE19BD" }, { "b" : "7F73D0E69000", "path" : "/lib/x86_64-linux-gnu/librt.so.1", "elfType" : 3, "buildId" : "FE41526A83999F2FE9D0F8AADCD61D03A92CBB70" }, { "b" : "7F73D0C65000", "path" : "/lib/x86_64-linux-gnu/libdl.so.2", "elfType" : 3, "buildId" : "6A5D98612129B8186F21E800AFDFAAA627082F46" }, { "b" : "7F73D08E3000", "path" : "/usr/lib/x86_64-linux-gnu/libstdc++.so.6", "elfType" : 3, "buildId" : "9E79D92950117355FD694E178C26ADE013CAE38B" }, { "b" : "7F73D05DF000", "path" : "/lib/x86_64-linux-gnu/libm.so.6", "elfType" : 3, "buildId" : "90DA054E12EA1A53EE0CBB5BB5E65F7069AEEE44" }, { "b" : "7F73D03C8000", "path" : "/lib/x86_64-linux-gnu/libgcc_s.so.1", "elfType" : 3, "buildId" : "036DAE71A7197C847FC5B720634642B922C74398" }, { "b" : "7F73D01AB000", "path" : "/lib/x86_64-linux-gnu/libpthread.so.0", "elfType" : 3, "buildId" : "968DF33F83963B559243653D74D27D89605BED02" }, { "b" : "7F73CFE0C000", "path" : "/lib/x86_64-linux-gnu/libc.so.6", "elfType" : 3, "buildId" : "79450F6E36287865D093EA209B85A222209925FF" }, { "b" : "7F73D3504000", "path" : "/lib64/ld-linux-x86-64.so.2", "elfType" : 3, "buildId" : "6F150F33B150D6A81E26A425DD47D713D00F2D29" }, { "b" : "7F73CE38F000", "path" : "/usr/lib/x86_64-linux-gnu/libicudata.so.57", "elfType" : 3, "buildId" : "2DCEE0955E6639060DE44DEF87E349D608549DEA" }, { "b" : "7F73CDF15000", "path" : "/usr/lib/x86_64-linux-gnu/libicui18n.so.57", "elfType" : 3, "buildId" : "DC010724B2591402197199B373006C25AA7BD8D7" }, { "b" : "7F73CDB6D000", "path" : "/usr/lib/x86_64-linux-gnu/libicuuc.so.57", "elfType" : 3, "buildId" : "4E0664B37A77B3EFED5E9C4E7A4E2E1BDB2B4FD9" }, { "b" : "7F73CD952000", "path" : "/usr/lib/x86_64-linux-gnu/libunwind.so.8", "elfType" : 3, "buildId" : "D018350F8DD20CC8574A21B2030049AB13E7CB1D" }, { "b" : "7F73CD72C000", "path" : "/lib/x86_64-linux-gnu/liblzma.so.5", "elfType" : 3, "buildId" : "D94951F95E154271AE7CF843CC9D6D67EA502F5D" } ] }}
       mongod(_ZN5mongo15printStackTraceERSo+0x3A) [0x555de9ca0e2a]
       mongod(+0x11E9C79) [0x555de9c9fc79]
       mongod(+0x11EA59F) [0x555de9ca059f]
       libpthread.so.0(+0x110C0) [0x7f73d01bc0c0]
       libc.so.6(gsignal+0xCF) [0x7f73cfe3efcf]
       libc.so.6(abort+0x16A) [0x7f73cfe403fa]
       mongod(_ZN5mongo13fassertFailedEi+0xA2) [0x555de9c1ce62]
       mongod(+0xF05272) [0x555de99bb272]
       mongod(__wt_eventv+0x42B) [0x555de90a0e06]
       mongod(__wt_err+0xA0) [0x555de90a0ef6]
       mongod(__wt_panic+0x24) [0x555de90a1154]
       mongod(__wt_bm_read+0x135) [0x555dea1fdb65]
       mongod(__wt_bt_read+0x20D) [0x555dea21a57d]
       mongod(__wt_page_in_func+0x1198) [0x555dea21e8e8]
       mongod(__wt_row_search+0x701) [0x555dea23efc1]
       mongod(__wt_btcur_insert+0x4AE) [0x555dea20d33e]
       mongod(+0x17A77C6) [0x555dea25d7c6]
       mongod(+0x183A476) [0x555dea2f0476]
       mongod(__wt_log_scan+0xAEC) [0x555dea28413c]
       mongod(__wt_txn_recover+0x398) [0x555dea2f0ce8]
       mongod(__wt_connection_workers+0x37) [0x555dea252e27]
       mongod(wiredtiger_open+0x1657) [0x555dea24b047]
       mongod(_ZN5mongo18WiredTigerKVEngineC1ERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES8_S8_mbbb+0xC40) [0x555de999e300]
       mongod(+0xEE1914) [0x555de9997914]
       mongod(_ZN5mongo20ServiceContextMongoD29initializeGlobalStorageEngineEv+0x3CE) [0x555de9885f4e]
       mongod(_ZN5mongo13initAndListenEi+0x48B) [0x555de90ee43b]
       mongod(main+0x72F) [0x555de90a1fbf]
       libc.so.6(__libc_start_main+0xF1) [0x7f73cfe2c2b1]
       mongod(_start+0x2A) [0x555de90e875a]
      ----- END BACKTRACE -----
      Aborted
      

       

       

      Can you please have a look at it and give any advice? All WiredTiger.* files from dpath are attached.

      The server is LXC container running Debian Stretch:

       

      # uname -a
      Linux vopicka.dev.dszn.cz 4.9.108-zen #1 SMP Fri Jun 15 09:22:41 CEST 2018 x86_64 GNU/Linux

       

      Thanks a lot.

      Attachments

        1. repair-attempt.tar.gz
          3 kB
        2. wt.tar.gz
          3 kB

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            nick.brewer Nick Brewer
            mbcko Martin Bak
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            Dates

              Created:
              Updated:
              Resolved: